Gene PMT9312_0891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0891 
Symbol 
ID3765692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp822855 
End bp823319 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content28% 
IMG OID637797413 
Productcondensin subunit ScpB 
Protein accessionYP_397387 
Protein GI78779275 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGGCA GACCAATAAC AAAAAAAGAT CTTTCAGAAA TTACTAATTC TGATATAAAT 
TCAATAAATG ATGCAATTAA AGATCTTAAA AATAAATACT CTGATCAAAA ATCAGCACTT
GAATTAAATG AAGTAAATAA TAGTTTTTGT CTCGAACTCA AATCTAGTCT TAATGATTTT
GTAGAGGACT TACTTCCTTC AGAGTTGAAA ACATCAGAAT TAAGGACATT AGCAACTATT
GCTATCAAAA AAAAGATCTT GCAATCTGAT CTTATACTTC TTAGAGGCTC AGGAGCTTAT
GATCATATTA AAGAATTATT AGAAAAGAAA TTCATTGTAA AACGTAGGCA AAAAGATGGT
AGATCATATT GGTTATCTTT ATCAGAAAAG TTTTTTCAAA CTTTTGCTGT GAGTAATGAC
TATCTCTCAA AAATAGGAAC CCGCAATAAT AAGCAGCAAC AATAA
 
Protein sequence
MKGRPITKKD LSEITNSDIN SINDAIKDLK NKYSDQKSAL ELNEVNNSFC LELKSSLNDF 
VEDLLPSELK TSELRTLATI AIKKKILQSD LILLRGSGAY DHIKELLEKK FIVKRRQKDG
RSYWLSLSEK FFQTFAVSND YLSKIGTRNN KQQQ