Gene PMT9312_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0682 
SymbolaroB 
ID3765483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp643794 
End bp644885 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content30% 
IMG OID637797204 
Product3-dehydroquinate synthase 
Protein accessionYP_397179 
Protein GI78779067 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.833789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAGA GAAAAATATT AGTCCCATTA GGTAATAAGT CATACGAAGT AACTATTGAA 
GCAGGGATAC TGAATAATAT CAGCGAAGAA CTTTTAAAAA TTGGAATAAC AAAGAATAGA 
AAAATACTTG TAATTTCAAA TGAAGAAATA TCAAATTTTT ATGGAGAAAA ATTCTTAAAT 
GATTTAAAAG ATAATAAATT TCAGGTCCAA ATGTTCCTTA TCAAGGCTGG AGAATCATAT 
AAAAACTTAA AAACCTTAAG TGAAATATAT GACGTTGCAT TTGAATTTGG TTTAGATAGA 
AATTCAATAA TTATTGCCCT TGGAGGAGGA ATTGTTGGAG ATGTAAGTGG TTTTGCAGCT 
GCGACTTGGC TGAGAGGTAT CGAATATATT CAGATTCCAA CAACTTTATT ATCGATGGTT 
GATTCATCTG TGGGAGGGAA AACAGGAGTA AATCATCCTA AAGGTAAAAA TTTAATTGGA 
GCTTTCAATC AACCTAAAGC AGTTTTTATT GATCCAGAAA CTTTAAAAAG TTTGCCCAAA 
AGAGAATTCA GTGCAGGTAT GGCCGAAGTA ATAAAATACG GAGTAATAAG AGATAAAGAA 
CTTTTCGAAT ACTTAGAAAT TGAAAAAAAC AAGAATGAAC TTATTAATCT GAAGAATGAA 
TATCTAATTA AAATAATTAA TAGTTCAATT AAAACAAAGT CTTATATTGT TTCTCAAGAC 
GAACATGAAA ATGGTGTTAG AGCAATATTG AATTATGGTC ATTCTTTTGG TCACGTTATT 
GAAAATTTAT GTGGATACGG CAAATTTCTA CATGGTGAGG CAATATCAAT TGGTATGAAT 
ATTGCAGGGG AAATAGCAAT TGATAAAGGG TTATGGTCTA AAGAAGAATT AGAAAGACAG 
AAGAATCTTT TGAAGAGTTA CGATCTTCCT ACCGAGATCC CCAAAATAAA TAAAGAAGAC 
GTTCTAACAA TACTTATGGG CGATAAAAAA GTTCGTAATG GCAAAATGAG GTTTATATTA 
CCGAAAGAAA TTGGTGTTGT GGATATATAT GATGACGTAG AAGATGCATT ATTTTTAAAG 
TTTTTTTCTT AA
 
Protein sequence
MNKRKILVPL GNKSYEVTIE AGILNNISEE LLKIGITKNR KILVISNEEI SNFYGEKFLN 
DLKDNKFQVQ MFLIKAGESY KNLKTLSEIY DVAFEFGLDR NSIIIALGGG IVGDVSGFAA 
ATWLRGIEYI QIPTTLLSMV DSSVGGKTGV NHPKGKNLIG AFNQPKAVFI DPETLKSLPK 
REFSAGMAEV IKYGVIRDKE LFEYLEIEKN KNELINLKNE YLIKIINSSI KTKSYIVSQD 
EHENGVRAIL NYGHSFGHVI ENLCGYGKFL HGEAISIGMN IAGEIAIDKG LWSKEELERQ 
KNLLKSYDLP TEIPKINKED VLTILMGDKK VRNGKMRFIL PKEIGVVDIY DDVEDALFLK 
FFS