Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0679 |
Symbol | |
ID | 3765480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 640981 |
End bp | 641754 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637797201 |
Product | putative transcripton factor |
Protein accession | YP_397176 |
Protein GI | 78779064 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAATTT TATCGATTAT TAAACCAAAT ATAGTTTTAT TCGTTGGTGA TATTTCTGAT GGGAGTGTCA AAATAATAAA AAAAATCAAT GAGATCAAAA TTCCTACTTT TGTGATTTTA GGAAATCATG ATAGAGGGAA AGATTCTACA GGCGTAACTC TCTCAAAGCA GATACGTGTT CTTGGTGAAA AATATTGTGC ATGGGATTTG AATGTTTTTA ATAATCAAAT AAATTTACTA TCCGCCAGAC CATGTAGTTC TGGCGGGGGC TATTATCTTT CGAAAGAAGT TAAAGGTGTT TATGGACCTA TCACCGAACA AGATTCAATA AATAAAATTA TCAAATGTTC GGAAAAGACT GTAGAAGATA TACCTTTAAT AATTATGTCT CATGCGGGCC CTTCGGGTTT AGGCTCAGAA CCTAAAAGCA TTTGTGGGAA AGACTGGAAA TTACCCTCTT TAGATTGGGG GGATAGAGAT TTGTCTGTGG CCATTTCTCA AATACAAAAA AGAAGAAAAG TTGATCTTGT AATTTTTGGT CATATGCACA ATCGCCTTAA AAGAAATCTT GGTTTAAGAG AGATGTTTAA AATTGATAGC AAAGGAACAA TTTATTTCAA CACTGCTGTT GTGCCAAGAT ATAAAACTGA TGAAGATGGG AAATTACTAA TTAACTTTTC TTGGATTGAG TTTGAAAAAA AGGAATTAAG ACATGTTTCT CATCGATGGT ATTCAGAGTC TGGTGAAATT TTTGAAGAAG ATAAATTTTT TTAG
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Protein sequence | MKILSIIKPN IVLFVGDISD GSVKIIKKIN EIKIPTFVIL GNHDRGKDST GVTLSKQIRV LGEKYCAWDL NVFNNQINLL SARPCSSGGG YYLSKEVKGV YGPITEQDSI NKIIKCSEKT VEDIPLIIMS HAGPSGLGSE PKSICGKDWK LPSLDWGDRD LSVAISQIQK RRKVDLVIFG HMHNRLKRNL GLREMFKIDS KGTIYFNTAV VPRYKTDEDG KLLINFSWIE FEKKELRHVS HRWYSESGEI FEEDKFF
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