Gene PMN2A_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1893 
Symbol 
ID3607305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp548887 
End bp549591 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content29% 
IMG OID637688786 
Productglycosyltransferase 
Protein accessionYP_293084 
Protein GI72383729 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGAT CACAAAAAAT TCCTGCTCTC AGCATCATCA TACCAACTTT AAATGAAGCG 
GATCACCTCC CTCTTCTTCT TGCTGATTTA AATGAATGGC CATATAATTT TGAATTAATC
ATAGTTGATG GAGGAAGTAT AGATTTAACT ATTTCGATTG CACAAATACA AGGAATAGAT
GTTATTAAAA GCAGTAAAAA GAATAGAGGC TATCAATTAA AAAAAGGTGC ATCAAATGCA
AGAGGAGATT GGCTTTTATT TCTACATGCC GATAGTAGAC TAAGACCCAC TTGGTTTAAA
AATTTATCTC AAATAATACA AAATAAAAAG TCAGAAAATT TTGCATGGTA TTTTGACTTT
AAAATCAAAA AACATAATTT AGAATTCAGA TTTTTAGAAA TAGCAGTAGC ACTAAGAAGT
TATTTCTTAC AACATCCTTA TGGAGATCAA GGCCTACTAA TACATAAAGA TCTCTATTCT
AATACAGGAG GGTATTCTTC CTTGAAAATA ATGGAAGATA TCGACTTGAT AACAAGAATT
ACTAAAAAGA CTAAAGTAAA GCGTATTAGA GAAAATATAT ATACAGATGA TATAAAGTGG
ACAAATTCAA ATATAATAAA ACGTGCAATT AAAAATGCTA AATTAAGAAA TAAGTGGCGT
CAGGGTTTTG ACATAGATTA TCTTTCAAAA GAATATAATT CATGA
 
Protein sequence
MARSQKIPAL SIIIPTLNEA DHLPLLLADL NEWPYNFELI IVDGGSIDLT ISIAQIQGID 
VIKSSKKNRG YQLKKGASNA RGDWLLFLHA DSRLRPTWFK NLSQIIQNKK SENFAWYFDF
KIKKHNLEFR FLEIAVALRS YFLQHPYGDQ GLLIHKDLYS NTGGYSSLKI MEDIDLITRI
TKKTKVKRIR ENIYTDDIKW TNSNIIKRAI KNAKLRNKWR QGFDIDYLSK EYNS