Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1593 |
Symbol | |
ID | 3606991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 264062 |
End bp | 265147 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637688471 |
Product | chorismate synthase |
Protein accession | YP_292784 |
Protein GI | 72383429 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.040702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAGTA GTTTCGGAAA ACTTTTTACT ATCAGCTCCT TTGGCGAATC TCACGGAGGT GGTGTTGGTG TAATTATTGA TGGATGTCCT CCAAGGTTGG AGCTCGACAT TAACGAGATA CAAAATGATC TCAATCGAAG GAGGCCAGGA CAAAGCAAAA TAACTACTCC AAGAAACGAA AGTGATGAAG TTGAAATTCT TAGTGGTCTT TTAGGTAATA AAACCTTAGG AACACCAATT GCCATGGTTG TAAGAAATAA AGATCATCGG CCTAAGGATT ATTCTGAAAT TAAAAAAACT TTTAGGCCAT CTCATGCTGA TGCTACATAT CAGAAAAAAT ACGGAATTCA GGCTTCAAGT GGCGGAGGGC GTGCATCAGC AAGAGAAACA ATAGGTAGAG TTGCCGCGGG TTCTGTTGCA AAGCAACTTC TAAATAAGTC TGCTAAAACG GAAATACTCG CTTGGGTAAA GAGAATTCAT GATATTGAGG CTGAGATTCA TCCGAGTGAA GTTACTTTTG ATGAGATTGA GAAAAATATT GTTCGATGTC CAAATCAGTC AGCTGCAGAT TTAATGATTC AGAGAGTGGA GGCTTTTGGT AAAGAAGGAG ACTCATGTGG TGGAGTAATA GAATGTGTTG TTCGGAATCC GCCAATAGGG ATTGGTATGC CTGTTTTTGA TAAGTTAGAA GCTGATTTAG CAAAGGCATT AATGTCTTTG CCTGCCACTA AAGGTTTTGA GGTGGGATCT GGTTTCGGAG GTACTTATTT GAAAGGCAGC GAACATAATG ATCCTTTTTT GCCATCCGAT TCCAATCAAT TGAAAACTGC CACTAACAAT TCAGGCGGAA TTCAAGGAGG TATCAGTAAT GGTGAGGATA TAGTCCTGAG AGTAGGTTTT AAACCAACAG CAACTATTAG GAAAAGTCAA AAGACAATTG ATGAGGATGG TAATGCAATA ACTCTCAAGG CGACAGGAAG ACATGATCCT TGTGTTTTGC CGAGGGCAGT TCCAATGGTT GAAGCAATGG TTGCGCTAGT TTTAGCTGAT CATTTACTAA GGCAAAGAGG CCAATGTCCT GACTAA
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Protein sequence | MGSSFGKLFT ISSFGESHGG GVGVIIDGCP PRLELDINEI QNDLNRRRPG QSKITTPRNE SDEVEILSGL LGNKTLGTPI AMVVRNKDHR PKDYSEIKKT FRPSHADATY QKKYGIQASS GGGRASARET IGRVAAGSVA KQLLNKSAKT EILAWVKRIH DIEAEIHPSE VTFDEIEKNI VRCPNQSAAD LMIQRVEAFG KEGDSCGGVI ECVVRNPPIG IGMPVFDKLE ADLAKALMSL PATKGFEVGS GFGGTYLKGS EHNDPFLPSD SNQLKTATNN SGGIQGGISN GEDIVLRVGF KPTATIRKSQ KTIDEDGNAI TLKATGRHDP CVLPRAVPMV EAMVALVLAD HLLRQRGQCP D
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