Gene PMN2A_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1550 
Symbol 
ID3606948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp219022 
End bp219576 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content37% 
IMG OID637688428 
Producthypothetical protein 
Protein accessionYP_292741 
Protein GI72383386 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAATT CCTCGACAAG CTCTGATCAA TTAGATGTAG ATCTTTCTTT TACACCCTTC 
CCAGTTCAAG ATTTGGATGT CTTTGTGAAC AGTGACACTT TAGAGTTGAT GAAAAATCCA
AGTAAATGGA TTGAGGAGAT AGGGAGCTGG ATTAGATTTA TACAAGTAAA TTCAGCATTG
AAGTGTCCGG AAATAGTCCT AAATTCGTCT CAATTTAGCT TGGGGTTGGA ATTAACTAAT
GATAAGAAAA TTCTTGATTT GAATCATGCC TGGCTTGGGC AATCAAAAGC TACAGATGTG
CTTTCATTTC CCATAATTGA TGAGACATTC TTTGGTGTAA GTAATGAATG TATCGAATTG
GGTGACATAG TTATCTCAGT CCCGACAGCA ATCAGGCAAG CCAAAGATAA TAATGCTGAT
TTATTTAGAG AACTAAGATG GCTTGCCACT CATGGTCTTT TACACCTTTT GGGTTGGGAC
CATAGCGACG AAGAGAGCCT TCATAAAATG CTTTTGATTC AAGAGCAACT TCTTGAAATT
AGAGGTATTC TTTAA
 
Protein sequence
MVNSSTSSDQ LDVDLSFTPF PVQDLDVFVN SDTLELMKNP SKWIEEIGSW IRFIQVNSAL 
KCPEIVLNSS QFSLGLELTN DKKILDLNHA WLGQSKATDV LSFPIIDETF FGVSNECIEL
GDIVISVPTA IRQAKDNNAD LFRELRWLAT HGLLHLLGWD HSDEESLHKM LLIQEQLLEI
RGIL