Gene PMN2A_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1460 
Symbol 
ID3606857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand+ 
Start bp138621 
End bp139781 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content31% 
IMG OID637688336 
Productexodeoxyribonuclease VII large subunit 
Protein accessionYP_292651 
Protein GI72383296 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTGATC TTAAAAACGC TAAACAATCT CTAACTACAT ATAGTGTTAA AGAGTTAAAC 
GAATCTATTG GCTTATTATT ATCAAGAGGC TTTGCCCCAA AGTTTATACT TGAAGCCGCT 
GTTTCTAAAT CACAAATAAA AAAAGGTCAT TTATGGTTAA CTTTAACGGA CGGGAAAGCA 
AGTGTAGATG CAGTTGCATG GTCATCAACA ATAAAGTCTT TAAAATTTTT ACCAAAGCAA 
GATGATGGCG TTGTTATTAT TGGTAAATTA AATTTCTGGG AATCTCAAGC AAGAGTATCG 
GTACAAGTTT TCGATATTCG ACCAAGTATT TCTACGGTTC TTAGGAAGTT TGAAATAGTC 
AAATCAAATC TTTTTAAAGA AGGTTTGATA GATGATTCGT TACGAAAAAA ATTGCCAAAA 
TATCCTCATT CACTTGGTAT CCTTACAAGT GTTCCAAGCT CTGCTTTAGC TGACATGCTT 
AGAACAGCTA AGGAGAGATG GCCATTAACG AAGCTGCAAA TAATTCCTAT TCCGGTTCAA 
GGTGATAATG CAAATAAACT AAAATCTATT TTAAGTAAAT TAAAAAAAAA TAAGTTACAA 
GTAGAGGCTT TAATTATAGC TAGAGGAGGA GGTAGCAGAG AAGATTTAAT GTTGTTCGAT 
AGTGAAATCA TAGCTAGAGA AATCGCAACT TTCCCAATAC CAGTAATTAC AGGGATAGGT 
CACGAAGATG ATCTAACTGT TGCTGATCTG GTTTCAGATC ATCGATCTGC CACTCCAACT 
GCTGCGATTG TTGATCTATT GCCCTCAAGA GAAATTGAAA AAAATAAGTT TTTGCAAAAT 
AAAAAATTAC TTAAATATTA TTTGAAATTA TTTTTTCAGA ACACAAAGAA AACATTAATT 
ACAAAAAAAT CTATTTTTCA ATCTTATTCA CCCCGACTAT TAATAAAAAA TAAAAGAACA 
AGAATAAATT ATATGTATGA GATTTTGAAT GCACTTTCTC CAAGAAAATT GTTAAAAAGA 
GGTTTTGCGC TAATTACTGA CGAGTCAGGT AATTCGATTT ATAGTGTAAA AAATATTAAG 
GAAAATGATA AGCTGATAGT TCAATTTTGT GATGGAAAAA TTACAGCAGA GGTTGATAGT 
CTTAATTATG ATAAAATATA A
 
Protein sequence
MTDLKNAKQS LTTYSVKELN ESIGLLLSRG FAPKFILEAA VSKSQIKKGH LWLTLTDGKA 
SVDAVAWSST IKSLKFLPKQ DDGVVIIGKL NFWESQARVS VQVFDIRPSI STVLRKFEIV 
KSNLFKEGLI DDSLRKKLPK YPHSLGILTS VPSSALADML RTAKERWPLT KLQIIPIPVQ 
GDNANKLKSI LSKLKKNKLQ VEALIIARGG GSREDLMLFD SEIIAREIAT FPIPVITGIG 
HEDDLTVADL VSDHRSATPT AAIVDLLPSR EIEKNKFLQN KKLLKYYLKL FFQNTKKTLI 
TKKSIFQSYS PRLLIKNKRT RINYMYEILN ALSPRKLLKR GFALITDESG NSIYSVKNIK 
ENDKLIVQFC DGKITAEVDS LNYDKI