| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1422 |
|---|
| Symbol | |
|---|
| ID | 3606818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 102613 |
|---|
| End bp | 103890 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637688297 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_292613 |
|---|
| Protein GI | 72383258 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATA ATCATTTAGC AATTATTTTT GTCTCAAATG GACCGGGTGA ACTAGCCACT
TGGGTGAATC CACTTGCTAA AGAGCTTCAT AAGCAAATAA AGCTAAAACC AAGAGTACAT
AATTCTTCAA AATCTTTAAA TTTGGTACTT GTTCCATGCC CTAATGCAAC TGGTAATGAA
ATTATTGCTG CAAAAAAATG GTTCCAATTT GAAAAAATAA TAAAAGCAAA AAATTTCTGG
AAACTTCTTT TAAACCCTAA AAAATTTGGT TCATGGCCAT CCAACGGGTT AGTAATTTTT
TTAGGTGGAG ATCAATTTTG GAGCGTTCTA CTTTCAGCAA GATTGGGATA TTTACATATG
ACATATGCCG AGTGGATCGC TAGATGGCCT TTTTGGAATA ATAGAATTGT TGCAATGTCC
GAAAGGATTG TTGATAAATT ACCAAAACGA ATTCAACCTC GTTGTTCAGT CATAGGAGAC
CTAACCGCTG ACTTAACTGA AACTGCAAAA ATTGATAATC CACTCCCCTC TGGAAAGTGG
ATTGCACTAC TACCAGGTTC AAAAAGTGCG AAACTAAAAA TTGGAATTCC ATTCTTTCTT
GAAGTAGCAG ATAAAATATC AAAATCAATG CCAGATTGTC AGTTTCTAAT ACCTCTTGCT
CCTACCACAA ATATAAATGA ACTTAAACAC TTTAGTAGTA GCAAAAATCC AATTTCAAAA
CAATATAAAT CTGGAATCAA ATCAATTACA AAAGCCAATA AAAAAGAAGG AAGAGGAGTA
TTGATAACTA ATAATTCTAC AGTTATTTTA ATACAAGAAA AGCATCCAGC ATATAGTGAT
CTAAGCCAGT GTGATATCGC ACTAACAACA GTAGGAGCTA ATACTGCTGA GCTTGGATCA
TTAAATATTC CAATGATAGT TGTTCTTCCT ACACAACACA TTTCAGTCAT GGAAGCATGG
GATGGATTTA TAGGTTTAAT AGCTAGATTG CCAATATTAA AATGGTGCAT AGGACTATTA
ATTAGCTTTA TAAAACTGAA AAAAAGAGGA TATATGGCTT GGCCAAATAT ATATGCAAAA
AAGATGATTG TCCCAGAAAG AGTTGGACAT ATAACCCCTG CACAAATAGC TGAAGAAACT
ATTGATTGGC TAAATTCACC TACAAGACTA TCTGGCCAAA GAGAAGATTT ACAATTACTA
AGGGGTAGTA AAGGTGCTGT AAAAAAATTT TGCTATCAAA TTATTAATCT TCTTGAAGAA
AAAAAGCTTT TAAATTAA
|
|---|
| Protein sequence | MSHNHLAIIF VSNGPGELAT WVNPLAKELH KQIKLKPRVH NSSKSLNLVL VPCPNATGNE
IIAAKKWFQF EKIIKAKNFW KLLLNPKKFG SWPSNGLVIF LGGDQFWSVL LSARLGYLHM
TYAEWIARWP FWNNRIVAMS ERIVDKLPKR IQPRCSVIGD LTADLTETAK IDNPLPSGKW
IALLPGSKSA KLKIGIPFFL EVADKISKSM PDCQFLIPLA PTTNINELKH FSSSKNPISK
QYKSGIKSIT KANKKEGRGV LITNNSTVIL IQEKHPAYSD LSQCDIALTT VGANTAELGS
LNIPMIVVLP TQHISVMEAW DGFIGLIARL PILKWCIGLL ISFIKLKKRG YMAWPNIYAK
KMIVPERVGH ITPAQIAEET IDWLNSPTRL SGQREDLQLL RGSKGAVKKF CYQIINLLEE
KKLLN
|
|---|
| |