| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1342 |
|---|
| Symbol | |
|---|
| ID | 3606737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 18172 |
|---|
| End bp | 18639 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637688218 |
|---|
| Product | methionine sulfoxide reductase B |
|---|
| Protein accession | YP_292534 |
|---|
| Protein GI | 72383179 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGAC TCTTGAATAC TCTTTTTGGT TTTACTATCA AACCAAAAAG CGCTTTTGCC
TCCTCTAAAT CTATGGAAAA CTATAAAACT CTAACTGATA CAGACTGGGA AAATCGTTTA
CCCAAAGATG CTTTTTACGT CTTACGAAAG GAAGGAACAG AGAGACCGTT TTCAAGTCCA
TTAAATGATG AAAAAAGGAA AGGAGTTTTT CGTTGTGCAG GATGCGGTCT TGCTTTATTT
TCTTCAACAA CAAAGTTTGA CAGTGGAACA GGCTGGCCAA GTTTTTTTGA TCATTTACCG
GATGCAATAG AGACAAAAAC AGACTTCAAA TTAATTGTCC CTAGAACTGA ATATCATTGT
CGACGATGTG GTGGGCATCA AGGACATGTT TTTAATGATG GTCCAAGACC CACTGGTAAA
CGATATTGTA ATAATGGCGT CGCTCTTGCA TTCGAAGTTG ATTCGTAA
|
|---|
| Protein sequence | MFGLLNTLFG FTIKPKSAFA SSKSMENYKT LTDTDWENRL PKDAFYVLRK EGTERPFSSP
LNDEKRKGVF RCAGCGLALF SSTTKFDSGT GWPSFFDHLP DAIETKTDFK LIVPRTEYHC
RRCGGHQGHV FNDGPRPTGK RYCNNGVALA FEVDS
|
|---|
| |