Gene PMN2A_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1295 
Symbol 
ID3606690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1802732 
End bp1803559 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content33% 
IMG OID637688172 
Productaminotransferase class-IV 
Protein accessionYP_292488 
Protein GI72383133 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.326181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA ATAAGAACGA AAAATTAGGA TGGATTAATG GTCATTGGGG AGTCTTCAAA 
GATTTAAAAG TGCCAATTAA TGATCGAGGT CTCAACTTTG CGGATGGCAT CTTTGAAACG
ATTTTAATTT TGAATGGAAT TCCACAGCTT CTAGATGAGC ATTTAAATAG ATGGGAAAAA
AGTGCAAGTA TCTTAGAAAT GAATTCCCCA CCATCGAAAG AATGGTTGAT TTCACTCGTT
GAAGATGGCA TTAATCAAGC ACAATTAAAG AACATCAATG GAGTCATTCG TATTAATTGG
ACCAGAGGAG AATCCGAACA ACGTGGAATT GATATCAGCA AGACAAGCCT TCATAGTTTT
TGGTTGGAGA TAGATTCTTA TCAACCAAAT TTTGAATCTA TATCTACAAT AATTAGTCAA
ACCGAAAGAA GAAATTCTTT TAGCCGATTG AGTTCTTGTA AAACATTTTC CTATAACCAA
GGGATTCAAG CACGTATTGA AGCAAAAAAT CTAGGCTTTA ATGATGCACT ATTATTAAAT
AGTCAAGGTG AAATATGTTG CGCCACGACA GCAAATATAT TAGTAAAAAG AGAAAATAAT
TGGTTAACTC CACCATCTAA TAGTGGTTGT CTACCTGGCA TAATGCGTCA AAGAGGAATT
GAGTTGAACA TAATAAAAGA AGCTCTCATT GAAGCGACAC CAAAAGATAA TGATGAATGG
TTTTTAATCA ATAGTTTAAG TTGTCGTCCA ATTCAAAAAA TAAACAAAAA AGAATTAAAA
ATATCAACTA ACCCCAAAGA ATTTTGGCTG AGTTTGTTAA AAATCTAA
 
Protein sequence
MTENKNEKLG WINGHWGVFK DLKVPINDRG LNFADGIFET ILILNGIPQL LDEHLNRWEK 
SASILEMNSP PSKEWLISLV EDGINQAQLK NINGVIRINW TRGESEQRGI DISKTSLHSF
WLEIDSYQPN FESISTIISQ TERRNSFSRL SSCKTFSYNQ GIQARIEAKN LGFNDALLLN
SQGEICCATT ANILVKRENN WLTPPSNSGC LPGIMRQRGI ELNIIKEALI EATPKDNDEW
FLINSLSCRP IQKINKKELK ISTNPKEFWL SLLKI