Gene PMN2A_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0842 
Symbol 
ID3606223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1347310 
End bp1348275 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content37% 
IMG OID637687708 
Producthypothetical protein 
Protein accessionYP_292036 
Protein GI72382681 
COG category[S] Function unknown 
COG ID[COG4371] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCAAAA CTATTCGCTT TAGTTGGATT AAAAGAAAAC AGATTTTTTC TTTTCTGGTT 
GTTTCAACAA TCATCTTTTT TTCTTTATTT ACCAATCCCA ACACTGCATC AGCAGCTAGT
GGAGGAAGAA TAGGTGGAGG AAGTTTTCAG GCGCCTTCAT CGCCACAAAG ACAAAATTAC
GGAGGCTATG GAGGCAATAA CTTTCGAGGT TATGGAGGTG GGTACAGAGG AGGAGGTATT
GGTTTTCCTT TCTTATTGCC AATATTTGGC TTTGGTGGAG GTGGGATTTT TGGTTTTTTA
ATACTTATGT CAATTGTTGG TGTAATTGTT AATTCATTTA AAAGCTCTTC AAATTTTTCC
AACGCAAGCA ATAACTCAAT AGTTTCTCAA TCAACGAACC CATCCAAGGT TTCTTTAATT
CAGTTTCAAA TTGGCTTACT GGCAAGTGCA AAAGAAATTC AAGTGAACCT AAGGGGGCTT
GCTGCCTCTT CAAACACATC AACGTCATCT GGCCTTCAAA GAGTTCTTCA AGACACAACA
CTGTCCTTAC TTAGGAAGCC TGAATTATGG GTCTATTCAA ATATAGAAAC AGGTTCTGTT
CCATATACCT CAGCAGAATC AACATTTAAT CGGATATCAA TAACTGAAAG AAGCAAACTA
AAAGCAGAGC TCACATCAAA CTATTCCGGT CAAATATCTA GCTCAACAAA TAAGCAATCC
AATCCTGGGG ATTCGGATTC AACAAATGAA TACATCGCAA TAACGATTCT CGTAGCAACA
AAAAAAGATC TAAGTCTTCA AAACTCCGCA AACACCGAAG TCATCACAGA AGCTTTGAGA
ATCTTAGGGT CAATATCATC TAATGACTTA ATTGCCTTAG AAGTTATCTG GCAACCTGAC
GGAGAAGGAG AGACCCTGAG AGAAGAAGAA CTAATAATTC AATACCCAAA TCTTAAACAT
TTATAA
 
Protein sequence
MFKTIRFSWI KRKQIFSFLV VSTIIFFSLF TNPNTASAAS GGRIGGGSFQ APSSPQRQNY 
GGYGGNNFRG YGGGYRGGGI GFPFLLPIFG FGGGGIFGFL ILMSIVGVIV NSFKSSSNFS
NASNNSIVSQ STNPSKVSLI QFQIGLLASA KEIQVNLRGL AASSNTSTSS GLQRVLQDTT
LSLLRKPELW VYSNIETGSV PYTSAESTFN RISITERSKL KAELTSNYSG QISSSTNKQS
NPGDSDSTNE YIAITILVAT KKDLSLQNSA NTEVITEALR ILGSISSNDL IALEVIWQPD
GEGETLREEE LIIQYPNLKH L