Gene PMN2A_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0556 
Symbol 
ID3605931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1057715 
End bp1058137 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content34% 
IMG OID637687416 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_291750 
Protein GI72382395 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.908284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTA GGATTAATTC TAATCTTGAA ATACCAGGTA ATGAAATAAA GTGGAGATTC 
TCTAGATCAT CAGGAGCTGG TGGACAGAAC GTAAATAAGG CAGACAGTCG AGCTGAAATT
GTATTTAACG TATCTGAATC AAAAACTTTA ACTCCATACC AGAAATTTAG AATCTCAATT
CAGGATGAAG TCAAGCTTTC TAATGGTTGT ATTTGTATAG CTGTTCAAGA TAAAAGAACA
CAATATCAAA ATAGACAATT AGCTATAAAT AGACTTACTT CAACCTTACG AGATCTTTTA
AAGCCACCTC CAAAGACAAG AAGGGAGACA ATACCTACTC GCTCATCACA GAGGAGGAGA
ATTGAGTCAA AGAAGAAAAG AGGTGAATTA AAAAGGAATA GGCAATCAAA TATTGATTAT
TAA
 
Protein sequence
MNLRINSNLE IPGNEIKWRF SRSSGAGGQN VNKADSRAEI VFNVSESKTL TPYQKFRISI 
QDEVKLSNGC ICIAVQDKRT QYQNRQLAIN RLTSTLRDLL KPPPKTRRET IPTRSSQRRR
IESKKKRGEL KRNRQSNIDY