| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90724 |
|---|
| Symbol | ACO2 |
|---|
| ID | 4839793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 1234016 |
|---|
| End bp | 1236530 |
|---|
| Gene Length | 2515 bp |
|---|
| Protein Length | 800 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640391108 |
|---|
| Product | aconitate hydratase |
|---|
| Protein accession | XP_001385589 |
|---|
| Protein GI | 150866103 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01340] aconitate hydratase, mitochondrial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.319181 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGAG CTAGAACTGC TGTGAATAGC GGAGCTGCCC GGGCAGTCAG AACGTTGGCT
ACCTCGGCTT CTTCTCCTGT TTTCAACTTC CCTGTACCTG AAGAGTATGT CTCGAGAACT
CCTCCATACT CCAAGTTGGT GAGCAACTTG AACAAGGTGA ACCAGATTTT CAACCACCAG
CCGTTGACCT TGGCCGAGAA GATTCTCTAC TCTCACTTGG TGGATCCAGA AGAGAGCTTG
GCTGCTGCCA ACGGGCTGAC TGCTAATATC AGAGGGGAAC AATACTTGAA GTTGAACCCA
GACAGAGTCG CTATGCAAGA TGCTTCTGCA CAGATGGCCC TCCTCCAGTT TATGACTTGT
GGAATGGCTT CAACGGCCGT GCCAGCCTCT ATCCACTGTG ACCACTTGAT TGTTGGCAAA
GACGGTGCCG AAGAAGACTT GGTCAAATCC ATTGCTACCA ACAAGGAAGT GTTTGATTTC
CTCCAGAGCT GTGGTGAAAA GTATGGTATC CAGTTCTGGG GCCCTGGCTC AGGTATCATC
CATCAGATCG TGTTGGAGAA TTTCTCTGTT CCCGGTTTAA TGATGTTGGG TACCGACTCC
CACACTCCCA ACGCCGGAGG CTTGGGTGCT ATTGCTATAG GTGTTGGTGG TGCTGACGCT
GTGGATGCCT TGACAGGTAC TCCATGGGAG TTGAAGGCTC CTAAGATCTT GGGTGTCAAG
CTCACTGGCC AGTTATCCGG CTGGTCGTCG CCAAAGGATG TTATCACTAA GTTGGCTGGT
ATCCTTACCG TCAGAGGGGG TACCGGGTAC ATTGTAGAGT ACTTCGGTGA AGGTGTCCAG
ACCTTGTCAT GTACCGGTAT GGCCACAATC TGTAATATGG GAGCGGAAAT TGGAGCCACG
ACGTCAACTT TCCCTTACCA GGATGCCCAT AGAAGGTACT TGGTAGAAAC CAACAGAGCT
CCGATTGCCG AAGCTGCAGA TGCCGTAAAT AAACAAGTAG GCTTCCTTCA AGCTGACAAG
GGTGCTGAAT ACGACAAGGT GGTTGAAATC AACCTCTCAG ACTTGGAGCC TCACGTCAAC
GGGCCATTCA CGCCAGATTT GTCTACTCCC ATTTCGCAGT TTGGTGCTGT AGCCCAGAAG
GAAGGCTGGC CACTGACTGT GTCTGCTGGC TTGATCGGTT CCTGTACCAA CTCTTCGTAC
CAGGACATGT CTCGTGCTGT TTCGATTATC AAACAGGCTG AAGCAGTAGG ATTAAAACCC
AAAATCCCCT TCTTTGTCAC TCCAGGTTCT GAGCAGATCA GAGCTACCAT TGAGAGAGAC
GGCTTGATTG ACACCTTTGA GAAGAACGGT GCCATAGTCT TGGCCAACGC CTGTGGACCA
TGTATTGGCC AATGGGACAG AACCGATGTA CCCAAGACCT CCACTGAGAC CAACGCCATC
TTCACGTCAT TCAACAGAAA CTTCCGTGCC AGAAACGATG GTAACAGAAA CACCATGAAC
TTCTTGACAT CGCCAGATAT GGTTACCGCA ATGATCTACT CTGGTGACGT CAACTACAAC
CCCATCACTG ATTCTATCAA GTTGGAAAAT GGGGAAGAGT TCAAGTTCCA GCCTCCTCAA
GGTGAAGAAT TACCTCTGCA TGGATTCATC AAGGGCCGTG AGCAGTTCTA TCCCGAAGCT
TCACCAAAAC CCAAGCCTGA AGTCTCAGTC AACGTCTCTC CAGAGTCCGA CAGATTACAG
TTGTTGGAAC CATTTTTGCC CTGGTCTGGT GAAGAGTTGT CTACTAATGT ATTGTTGAAG
GTAGAAGGCA AATGTACCAC AGATCATATC TCTGCCGCCG GTGCATGGTT AAAGTACAAG
GGACATTTGG AAAACATTTC CTACAACACG TTGATCGGTG CTGTAAATAA GGAAACCGGT
GAAGTAAACA AGGCCTACGA CTTGAACGGA GACCTGTACA GCATTCCCGA GCTTATGATT
AAGTGGAAGG AAGAAGCCAG ACCCTGGGTT GTTGTAGCAG AGCACAATTA TGGTGAAGGT
TCAGCCAGAG AACATGCAGC TTTGTCTCCT AAATTCCTTG GTGGCTCGAT CATCTTGGTC
AAGTCGTTTG CCAGAATCCA CGAGACCAAC TTGAAGAAGC AGGGTATGTT GCCTTTGACT
TTTGCTGACG AAGCCGACTA CGACAAGATT TCATCTGGAG ACCTTTTGAC CACTGTCGAT
TTGAAGGACA TGATAGCCAA GAACGGCAAC AATGGTGGTG TCTTGACAGT CAAGGTCACC
AAGAAGGACG GTTCTACTTT TGACATCTTG TGTAAGCACA CCATGTCCAA GGACCAAGTG
GATTTCTTCA AAGCTGGTTC AGCCATCAAC CACATTGGTA ACTTGAAAAG AGCACAAGCC
TGATAACACA AACCTTTTAT AACATAGCAT TCTTTATTTA GTTCAACAAT ACTGTTGGCT
ATGTCAGCAG TCAATTATTT ATAAAAATAA TACTCCAAAC AATTATCCAC TCGAT
|
|---|
| Protein sequence | MLRARTAVNS GAARAVRTLA TSASSPVFNF PVPEEYVSRT PPYSKLVSNL NKVNQIFNHQ
PLTLAEKILY SHLVDPEESL AAANGSTANI RGEQYLKLNP DRVAMQDASA QMALLQFMTC
GMASTAVPAS IHCDHLIVGK DGAEEDLVKS IATNKEVFDF LQSCGEKYGI QFWGPGSGII
HQIVLENFSV PGLMMLGTDS HTPNAGGLGA IAIGVGGADA VDALTGTPWE LKAPKILGVK
LTGQLSGWSS PKDVITKLAG ILTVRGGTGY IVEYFGEGVQ TLSCTGMATI CNMGAEIGAT
TSTFPYQDAH RRYLVETNRA PIAEAADAVN KQVGFLQADK GAEYDKVVEI NLSDLEPHVN
GPFTPDLSTP ISQFGAVAQK EGWPSTVSAG LIGSCTNSSY QDMSRAVSII KQAEAVGLKP
KIPFFVTPGS EQIRATIERD GLIDTFEKNG AIVLANACGP CIGQWDRTDV PKTSTETNAI
FTSFNRNFRA RNDGNRNTMN FLTSPDMVTA MIYSGDVNYN PITDSIKLEN GEEFKFQPPQ
GEELPSHGFI KGREQFYPEA SPKPKPEVSV NVSPESDRLQ LLEPFLPWSG EELSTNVLLK
VEGKCTTDHI SAAGAWLKYK GHLENISYNT LIGAVNKETG EVNKAYDLNG DSYSIPELMI
KWKEEARPWV VVAEHNYGEG SAREHAALSP KFLGGSIILV KSFARIHETN LKKQGMLPLT
FADEADYDKI SSGDLLTTVD LKDMIAKNGN NGGVLTVKVT KKDGSTFDIL CKHTMSKDQV
DFFKAGSAIN HIGNLKRAQA
|
|---|
| |