| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89948 |
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| Symbol | SEC4 |
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| ID | 4839122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 515951 |
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| End bp | 516762 |
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| Gene Length | 812 bp |
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| Protein Length | 207 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390437 |
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| Product | GTP-binding protein |
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| Protein accession | XP_001384762 |
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| Protein GI | 150865512 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0054767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAGTACCA GAGCTGCCCC CTCGAGATCA TATGATATGA TCATGAAGTT GTTGTTGGTT
GGAGACTCCG GCGTAGGAAA GTCGTGTTTG TTGTTACGTT TTGTTGAAGA CAAATTCAAC
CCCTCGTTCA TCACCACGAT TGGGATCGAC TTCAAGATTA GAACCATCGA AAGCAAAGGC
AAGAAGATCA AGTTGCAAGT GTGGGACACT GCTGGCCAAG AGCGTTTCAG AACCATCACC
ACCGCCTACT ACCGTGGAGC CATGGGTATT GTCTTGATTT ACGACGTGAC CGACTCCAGA
TCGTTCGAGA ACGTGGACAA CTGGTTCCAG ACCGTGACAC AACACGCCAA TGAAGATGCA
CAGATCTTCT TGGTAGGCAA CAAATGTGAC GACGAGTCTA ACAGACAAGT CTCCAAAGAG
CAGGGCCAGG AATTGGCTCT GAAATTGAAC ATTCCTTTCT TGGAAGCCTC GGCAAAGAGC
AACGAAAACG TTGACTCTAT CTTCTACGAA TTGGCCGGCA TCATCCAAGA TAAACATGTA
GATGAACAGA CTACTTCTGG TTCTGCAGGA GGCATTGATG TCTCGCTGAG CTCTAAGAGC
GGTATCAAGA ACAACTGTTG TTGATCGACT GAATAAACTA ATTTGAACAA AATTGAACTA
AAAAGAGAAT TGAAAATGAA ATTGAATACT GAAAATTGAA TATTAGATGA ATAATTCAAG
TCAACTATAC TGATTACTTG AAAAACTTGA ATTTTGATGT TGAATAATAA ATGAACTATT
GATCAACTGA AAATGAATAT GAATTCAAAT TG
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| Protein sequence | MSTRAAPSRS YDMIMKLLLV GDSGVGKSCL LLRFVEDKFN PSFITTIGID FKIRTIESKG
KKIKLQVWDT AGQERFRTIT TAYYRGAMGI VLIYDVTDSR SFENVDNWFQ TVTQHANEDA
QIFLVGNKCD DESNRQVSKE QGQELASKLN IPFLEASAKS NENVDSIFYE LAGIIQDKHV
DEQTTSGSAG GIDVSSSSKS GIKNNCC
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