| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89565 |
|---|
| Symbol | DLD2 |
|---|
| ID | 4839180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | - |
|---|
| Start bp | 1018369 |
|---|
| End bp | 1019982 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640390495 |
|---|
| Product | mitochondrial D-lactate dehydrogenase |
|---|
| Protein accession | XP_001385205 |
|---|
| Protein GI | 150865829 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCTT TGGCTTTCTC TACCAGAGTT TCTGCTGTAG CCAGATCGTC GGCCCGAGTC
AGAGCTGTAG GAGTCAGACT GTATTCGAGC AAGTCTGTAC CTCTCACGGC CGAGACCTAT
GCTCTGAGAG TGCAACGTAA TGAAAGCTTC AAGAAGTTGG AAGAAGATGA CGTTGCTTTC
TTCCGTGGCG TCTTGCAAGA CGACCATGGC GTTATCACCG ATGCTGACGA TTTGCTCTTC
TACAACGAAG ACTGGATGAG AAAATACAGG GGCCAGTCTT CCTTGGTATT GAAGCCCAAG
ACCACGGAGC AGATTTCGAA GATTTTGGCC TACTGTAATG AAAAGAAACT CGCTGTAGTG
CCCCAGGGTG GTAACACCGG TTTGGTTGGA GGCTCTAATC CTGTTTTTGA TGAGATCGTC
ATCTCGTTAT CGTCGTTGAA CAAGATCAGA TCGTTTGACC CAGTGAGTGG GATCTTGAAA
TGCGACTCTG GTGTCATTTT GGAAACAGCA GACCAGTTTT TGGCTGAAAA CGGTTACATC
TTCCCACTTG ACTTGGGTGC CAAAGGCTCC TGCCATGTAG GTGGTACCGT TGCTACCAAT
GCCGGTGGTT TGAGATTGTT GAGATACGGT TCCTTGCACG GTTCTGTGCT AGGCTTGGAA
GCAGTTCTTC CTGATGGAAC TATCTACAAC TCTTTGGACT CTTTGAGAAA AGACAACACT
GGTTATGACT TGAAGCAGTT GTTCATAGGC TCAGAAGGTA CGATCGGGAT CATCACCGGA
GTGTCTATTT TGTGTCCTTC CAGACCTGTC GCTTTCAACG TAGCCTTTTT AGCCGTGTCT
TCATACGAAG CCGTGCAAAA GGTGTTTGTA GGAGCACGTA GAGAGTTGTC AGAGATCTTG
TCGGCCTTTG AGTTCATGGA CGGAAAGTCT CAAGTCTTGA CTGCCCGTCA CTTGAAGTTG
GATCACCCCA TCGAAAGTGG AGAGTATCCT TTTTATATCT TGATTGAAAC CTCTGGCTCA
AACAAGGAAC ACGACGACGA AAAGTTGGAG ACCTTCTTGG GAAATGCCAT GGAAGAAGGC
TTGGTTGACG ACGGTATCAT TGCCCAAGAC GATACCCAAG TCAAGTCGTT GTGGTCTTGG
AGAGAGTCTA TTCCTGAAGC TTCCACTATC GGTGGAGGTG TTTACAAGTA CGATGTCTCT
TTACCTTTGG CAGACTTGTA TGGCTTGGTG GAAGAGGCTA ATGTGAAATT AGCTAAAGCT
GGTATTGTTG GCCTTGACGA CGAGTCCAAG CCAGTTGTTG ATGCCATTGG TTACGGTCAC
GTTGGGGATG GCAATTTGCA CTTGAACGTT TGTGTCAGAG AATACTCCAA GGAAATTGAA
GCAGTCTTGG AGCCTTTTGT CTACGAATGG ATCCAAAGCA AGAAGGGATC AATTTCCGCT
GAACATGGCT TGGGTTTCCA AAAGAAGAAC TACATCGGCT ACTCCAAGAG TGATATCGAA
ATCAAGATGA TTAAGGAAAT CAAGAACCAC TACGATCCAA ATGGTATCAT GAACCCTTAT
AAGTATGTGT AGAGCATATA GACATTATCA TAGTAAATAA TCATAGAACG CATA
|
|---|
| Protein sequence | MASLAFSTRV SAVARSSARV RAVGVRSYSS KSVPLTAETY ASRVQRNESF KKLEEDDVAF
FRGVLQDDHG VITDADDLLF YNEDWMRKYR GQSSLVLKPK TTEQISKILA YCNEKKLAVV
PQGGNTGLVG GSNPVFDEIV ISLSSLNKIR SFDPVSGILK CDSGVILETA DQFLAENGYI
FPLDLGAKGS CHVGGTVATN AGGLRLLRYG SLHGSVLGLE AVLPDGTIYN SLDSLRKDNT
GYDLKQLFIG SEGTIGIITG VSILCPSRPV AFNVAFLAVS SYEAVQKVFV GARRELSEIL
SAFEFMDGKS QVLTARHLKL DHPIESGEYP FYILIETSGS NKEHDDEKLE TFLGNAMEEG
LVDDGIIAQD DTQVKSLWSW RESIPEASTI GGGVYKYDVS LPLADLYGLV EEANVKLAKA
GIVGLDDESK PVVDAIGYGH VGDGNLHLNV CVREYSKEIE AVLEPFVYEW IQSKKGSISA
EHGLGFQKKN YIGYSKSDIE IKMIKEIKNH YDPNGIMNPY KYV
|
|---|
| |