| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89215 |
|---|
| Symbol | |
|---|
| ID | 4838960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | - |
|---|
| Start bp | 547062 |
|---|
| End bp | 547871 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640390275 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384401 |
|---|
| Protein GI | 126135754 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AATCAGTTTA CTTTACCAAA TACCTTTGGG AGACGAAATC ACATAGATAA TCATGTCTAA
GATCACCAGT TCCCACGTCC GTGAAAACGT GCACAAGTTG TTGGAATACT CCACCGAAAC
CAAGAAGAGA AACTTCTTGG AAACCGTCGA ATTGCAAGTC GGTTTGAAGA ACTACGACCC
TCAAAGAGAC AAGCGTTTCT CTGGTACCTT GAAGTTGCCT CAAGTCCCAA GACCAAACAT
GACTCTCTGT ATCTTCGGTG ATGCCTTCGA TGTCGACAGA GCTAAGTCCG TTGGTGCTGA
AGCCATGTCT GTTGAAGACT TGAAGAAGTT GAACAAGAAC AAGAAGTTGA TCAAGAAGTT
GGCCAAGAAG TACAACGCCT TCATCGCTTC CGAAGTTTTG ATCAAGCAAA TCCCAAGATT
GTTGGGTCCA ACTTTGTCCA AGGCCGGTAA GTTCCCAACC CCAGTCTCCC ACAACGATGA
CTTGTACGGT AAGATCCAAG ACGTCAAGTC CACCATCAGA TTCCAATTGA AGAAGGTCTT
GTGTTTGGCT GTTGCCGTCG GTAACGTCGA AATGGACGAA GACATCTTGG TTAACCAAAT
CATGATGGCT GCTAACTTCT TGGTCTCCTT GTTGAAGAAG AACTGGCAAA ACGTCGGTTC
CTTGGTCATC AAGTCCACCA TGGGTCCATC TTTCAGAATC TACTAATCGT GCCACTTTAG
TGTAGGTGTC TATTAGGAAA TTCGAAAACA AAAATGATCT ATTTAGGTTA GATTCTATGT
ACTTTGCATA ATAATAATAC TTGAATTGTC
|
|---|
| Protein sequence | MSKITSSHVR ENVHKLLEYS TETKKRNFLE TVELQVGLKN YDPQRDKRFS GTLKLPQVPR
PNMTLCIFGD AFDVDRAKSV GAEAMSVEDL KKLNKNKKLI KKLAKKYNAF IASEVLIKQI
PRLLGPTLSK AGKFPTPVSH NDDLYGKIQD VKSTIRFQLK KVLCLAVAVG NVEMDEDILV
NQIMMAANFL VSLLKKNWQN VGSLVIKSTM GPSFRIY
|
|---|
| |