| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86817 |
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| Symbol | RSA2 |
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| ID | 4851965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3315939 |
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| End bp | 3317614 |
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| Gene Length | 1676 bp |
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| Protein Length | 506 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393673 |
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| Product | Ribosome assembly protein |
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| Protein accession | XP_001387204 |
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| Protein GI | 126276160 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.189505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAA GATCTGCTCC TGAGGACGCT ATCGAACAGC TGAGTGTATC TGCTGTCAAG
ACCTCCAAGG AATCCGTACC TAAATCCAAT GTCGTAGAGG AAAATGACAT CGACATGGGG
GAGTTTGAAG ATCCGTACGG AGACGAGTTT GAGAGTGATG GGGAAATTAT TGAAGTCGAT
TCTGCTGAAG ATGACGATGA GGAATTGGAC CCAGAAGCTG TTGCCAAGAA GATCGAGCTG
GAAGAACAGA GAGAGCAACA AGAAGAAGAA TCCACTATTT ATCTTCCACA TAGATCCAAA
CCATTGGGAC CGGATGAAGT CTTAGAAGCC GATCCTACAG TATACGAGAT GTTACATAAT
GTTAATTTGC CATGGCCCTG TTTAACTGTT GATATTTTAC CGGATAACCT TGGTAACGAA
AGAAGAACAT ATCCCGCTTC GCTTTATTTG ACTACTGCTA CCCAGGCTTC GCGGGGAAAT
GCCAATGAGT TGATCACTAT GAAGTTGTCT TCCTTAGCGA AAACTTTGGT TAAGGACGAT
GAAGAAGATG ATGAAGACGA CAATGAAGAC GAAGACGAAG ATGTGGACCC AGTTATGGAC
TCAGAAATTA TTTCATTGAA GCACACCACT AATAGAATCA GAGTGTCTCC TCATGCTTCG
CAAACTGGCG AGTACTTGAC AGCCACCATG TCTGAAAGTG GCGAAGTTCT CATTTTCGAC
GTAGCATCGC AATTTAAAGC ATTTGACACT CCTGGATTTG TAGTCCCCAA GGGTGCCAAA
AGACCTATCC ATACTATTAG AACTCATGGA AATGTAGAAG GCTATGGTTT GGATTGGTCC
CCTTTAATCA ACACTGGTGC CTTGTTATCT GGAGACTTGA CTGGCAGAGT TCATTTGACT
TCTAGAACTA CATCCAACTG GGTTACAGAC AAAACCCCTT TTTTTGCATC TCAATCCTCC
ATTGAAGACA TCCAGTGGTC TACAAGTGAA AACACTGTTT TCGCAACTGC TGGAACTGAT
GGGTACGTCC GGATCTGGGA TACGAGATCC AAGAAACACA AGCCTGCTCT TTCTGTGGTT
GCTTCTAACA CTGATGTTAA CGTCATTTCT TGGTGCAACA AGATCAGCTA CTTGTTGGCT
TCTGGTCACG ACGATGGATC CTGGGGCGTC TGGGATTTGA GAAACTTCAA TGCCAATACA
ACTCCTACTC CTGTAGCTAA CTACGACTTC CATAAGTCTG CCGTTACGTC CATCTCATTC
AATCCATTGG ACGAATCAAT CATTGCCGTT TCGTCGGAAG ACAACACTGT CACTCTTTGG
GACTTGGCCG TTGAGGCCGA TGACGAAGAA ATCTCTAATC AAAGAAAAGA AACCAAGGAG
TTGGATGATA TTCCTCCACA ATTGTTATTT GTGCATTGGC AAAAAGATGT AAAGGACGTC
AGATGGCACA AACAAATCCC AGGATGCTTG GTCTCTACTG GTGGAGATGG TTTGAACGTA
TGGAAAACCA TTTCTGTCTG AGTAAAGGAG CACCTGAAAG TACCCACCTT CCCATATATG
CATTGCTCCA TCATTTGTAC AGTAGTCTAC CTTTAGAATA TGTTAATTAG ATCTTCTTGG
AAATATAACT TCTTTCTCAG TTCAACGCTT GGCGTGCCTC GATGAACATA TACTTA
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| Protein sequence | MSKRSAPEDA IEQLSVSAVK TSKESVPKSN VVEENDIDMG EFEDPYGDEF ESDGEIIEVD
SAEDDDEELD PEAVAKKIEL EEQREQQEEE STIYLPHRSK PLGPDEVLEA DPTVYEMLHN
VNLPWPCLTV DILPDNLGNE RRTYPASLYL TTATQASRGN ANELITMKLS SLAKTLVKDD
EEDDEDDNED EDEDVDPVMD SEIISLKHTT NRIRVSPHAS QTGEYLTATM SESGEVLIFD
VASQFKAFDT PGFVVPKGAK RPIHTIRTHG NVEGYGLDWS PLINTGALLS GDLTGRVHLT
SRTTSNWVTD KTPFFASQSS IEDIQWSTSE NTVFATAGTD GYVRIWDTRS KKHKPALSVV
ASNTDVNVIS WCNKISYLLA SGHDDGSWGV WDLRNFNANT TPTPVANYDF HKSAVTSISF
NPLDESIIAV SSEDNTVTLW DLAVEADDEE ISNQRKETKE LDDIPPQLLF VHWQKDVKDV
RWHKQIPGCL VSTGGDGLNV WKTISV
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