Gene PICST_86681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_86681 
Symbol 
ID4851737 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2698718 
End bp2699989 
Gene Length1272 bp 
Protein Length189 aa 
Translation table 
GC content40% 
IMG OID640393445 
Productpredicted protein 
Protein accessionXP_001387083 
Protein GI126275430 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2147] Ribosomal protein L19E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.696448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.779358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AACTACTCAG TAATCAAAAT GTAAGTGAAG ACTAGCATTG AAAGCGAGAC ATAGAATGAC 
GTACAACAGT ATCAGAACAC GAAGAATACC AGAAGTCAAA GAATTGGACT CGTAATTCGT
TGAATCGGAG CGATGTCCGA TGAGTCAGAA TAAGGGGCAA AACCAGGGGT TCCATAGTCT
GAGAACTCTA CAGTAAACCT TCCCCTATAT GCTCACCAAT CTCATCAGAA TGTCTATCCC
GTAAACAGAT ACGAAAACTA GAAGAATTTG CGGAAGATTT TGCTGATCTT CATGGACGTA
AAATCTTTCA GAAAAATCTC ATAAAGTCTT CAGTTCAATG AGCACAAGAC AAAATTTCAA
ATTCTGATCA GTGGATATCA TCGTAGTCAA GAGTGAATGT ATTAGATGCC AAGGAGTCGT
TTTATGTCTC AATCATGTAC CATTATTATC AATAACTCAT ACTAACATAT TATAGGGCTA
ACCTTAGAAC TCAAAAGAGA CTTGCTGCCA GTGTTGTTGG TGTTGGTAAG AGAAAGATCT
GGTTGGACCC TAACGAAACC ACCGAGATCG CTAACGCCAA CTCCCGTCAA GCCATCAGAA
AGTTATACAG AAATGGTACC ATCGTCAAGA AGCCAGTTAC TGTCCACTCC AGATCCAGAG
CTAGAGCTTT GTTAGAATCT AAGAGAGCCG GTAGACACAT GGGTTACGGT AAGAGAAAGG
GTACCAAGGA CGCTCGTATG CCATCCCAAG TTTTGTGGAT GAGAAGATTG AGAGTTTTGA
GAAGATTGTT GGCCAAGTAC AGAGATGCTG GTAAGATCGA CAAGCACTTA TACCACAACT
TATACAAGTC TGCCAAGGGT AACACTTTCA AGCACAAGAG ATCTTTGGTT GAACACATCA
TCCAAGCCAA GGCCGAAGCC TTGCGTGAAA AGGCTCTTAA GGACGAAGCT GAAGCTAGAA
GAGCTAGAAA CAGAGCTGCT CGTGAAAGAA GACAACAAAG AGTCGCTGAA AAGAGAGAAG
CTTTCTTGGC TGAATCTAAC TAAGCGTATG AATGATCGAA ATCCATCAAT CAAGAAGCCA
CTGTTGATCA TTTTGAGAAA CGTTCATTAT ATTTTTAATA TACACATATT ATTCTAATAG
TTTCTATTGT TCTGATTTGG CTGTTGGTGC TTGATTATTC TCTTCCTGTG CTTTATTTTC
CACCCATTTC CTGTTTATTA TATATGGTTA TATGTAAATG ACATCTGTAT AAGTAGACGA
GTGTAGATGT GT
 
Protein sequence
MANLRTQKRL AASVVGVGKR KIWLDPNETT EIANANSRQA IRKLYRNGTI VKKPVTVHSR 
SRARALLESK RAGRHMGYGK RKGTKDARMP SQVLWMRRLR VLRRLLAKYR DAGKIDKHLY
HNLYKSAKGN TFKHKRSLVE HIIQAKAEAL REKALKDEAE ARRARNRAAR ERRQQRVAEK
REAFLAESN