Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_86681 |
Symbol | |
ID | 4851737 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2698718 |
End bp | 2699989 |
Gene Length | 1272 bp |
Protein Length | 189 aa |
Translation table | |
GC content | 40% |
IMG OID | 640393445 |
Product | predicted protein |
Protein accession | XP_001387083 |
Protein GI | 126275430 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2147] Ribosomal protein L19E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.696448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.779358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AACTACTCAG TAATCAAAAT GTAAGTGAAG ACTAGCATTG AAAGCGAGAC ATAGAATGAC GTACAACAGT ATCAGAACAC GAAGAATACC AGAAGTCAAA GAATTGGACT CGTAATTCGT TGAATCGGAG CGATGTCCGA TGAGTCAGAA TAAGGGGCAA AACCAGGGGT TCCATAGTCT GAGAACTCTA CAGTAAACCT TCCCCTATAT GCTCACCAAT CTCATCAGAA TGTCTATCCC GTAAACAGAT ACGAAAACTA GAAGAATTTG CGGAAGATTT TGCTGATCTT CATGGACGTA AAATCTTTCA GAAAAATCTC ATAAAGTCTT CAGTTCAATG AGCACAAGAC AAAATTTCAA ATTCTGATCA GTGGATATCA TCGTAGTCAA GAGTGAATGT ATTAGATGCC AAGGAGTCGT TTTATGTCTC AATCATGTAC CATTATTATC AATAACTCAT ACTAACATAT TATAGGGCTA ACCTTAGAAC TCAAAAGAGA CTTGCTGCCA GTGTTGTTGG TGTTGGTAAG AGAAAGATCT GGTTGGACCC TAACGAAACC ACCGAGATCG CTAACGCCAA CTCCCGTCAA GCCATCAGAA AGTTATACAG AAATGGTACC ATCGTCAAGA AGCCAGTTAC TGTCCACTCC AGATCCAGAG CTAGAGCTTT GTTAGAATCT AAGAGAGCCG GTAGACACAT GGGTTACGGT AAGAGAAAGG GTACCAAGGA CGCTCGTATG CCATCCCAAG TTTTGTGGAT GAGAAGATTG AGAGTTTTGA GAAGATTGTT GGCCAAGTAC AGAGATGCTG GTAAGATCGA CAAGCACTTA TACCACAACT TATACAAGTC TGCCAAGGGT AACACTTTCA AGCACAAGAG ATCTTTGGTT GAACACATCA TCCAAGCCAA GGCCGAAGCC TTGCGTGAAA AGGCTCTTAA GGACGAAGCT GAAGCTAGAA GAGCTAGAAA CAGAGCTGCT CGTGAAAGAA GACAACAAAG AGTCGCTGAA AAGAGAGAAG CTTTCTTGGC TGAATCTAAC TAAGCGTATG AATGATCGAA ATCCATCAAT CAAGAAGCCA CTGTTGATCA TTTTGAGAAA CGTTCATTAT ATTTTTAATA TACACATATT ATTCTAATAG TTTCTATTGT TCTGATTTGG CTGTTGGTGC TTGATTATTC TCTTCCTGTG CTTTATTTTC CACCCATTTC CTGTTTATTA TATATGGTTA TATGTAAATG ACATCTGTAT AAGTAGACGA GTGTAGATGT GT
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Protein sequence | MANLRTQKRL AASVVGVGKR KIWLDPNETT EIANANSRQA IRKLYRNGTI VKKPVTVHSR SRARALLESK RAGRHMGYGK RKGTKDARMP SQVLWMRRLR VLRRLLAKYR DAGKIDKHLY HNLYKSAKGN TFKHKRSLVE HIIQAKAEAL REKALKDEAE ARRARNRAAR ERRQQRVAEK REAFLAESN
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