| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85554 |
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| Symbol | CIT1 |
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| ID | 4841140 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 702718 |
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| End bp | 705065 |
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| Gene Length | 2348 bp |
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| Protein Length | 466 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640392455 |
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| Product | citrate synthase (CISY) |
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| Protein accession | XP_001386727 |
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| Protein GI | 126140410 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01793] citrate (Si)-synthase, eukaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0177794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.167856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAATCTTTGT ATTGTTTTCT ACTTAGTTAT CATGTCTGCC TTCAGATCTA TTCAAAAGTC
TTCGACCTTG GCCAAGAAGG CTGCCTTCTC CAGTGTCAGA ACCTATGCCA CTGCTGAGCC
AGTATGTATA GCCATTCAGA GCCCAGTCCA TGTCTAGCAG ATGTCCTTCT GTGGATCACT
CTGTTAGAGG AGCCTGGCAA TCTCTTTGTG CTAGCTTTGT TTTCGGCATT CACCACGAAT
GCCTCTGAAG AATTGCTAGG CATTGAGCTC GTAACGTACT CGTTTTCATA TACTAACGTT
TCCCACTATA GACCTTGAAG GCCAGATTGG CCGAAATCTT GCCAGAAAAG GCTGAAGAAG
TCAAGCAATT GAAGAAGGAA TATGGTAAGA CCGTATGTAT CACCTATTTG TATATACTAT
TAACCGACCC ATCGTGCCAT TCGGCTACCC TACGTCTAGT TGAAAGGGAG AACAAAAAAG
CATGATCCCA GGCATCTGGT TGCAGTTCTA CTAATTTATC GCGACCTCTG AAAATTTCGG
CATCTCCGAA ATGTGAGCCA CAAAATGTGC CGAGATGTCA GACATTCCAG CACCACAAAG
TGAACAGAAA AATGTGCCAA TTCGTCTAGT ATTTGGGATG GCCATCTCAT CTCAACCCAG
GCTAGCGCAT CTGGTGCGGT TTCTGGTCAA TGGGGGTGTT AAAGCAGATT GTCTGCATCA
TGTTTTGCTT CAGCGTCAGT GTGAAAATTT TTGTCCTCTG TTATTTTCTA GACAGGTCGT
AATTTTTTCT GTCCGCTGTG AGGTCCTCGG ACTTTATGTG CCATGAGGTG AAATATGCTT
TTGTGCATGT ACTGCATGCA CGAACTTGTG GGGGTGGGGC ATTAATGGGG AAAGTGTGTT
TTGGATTAAA TACTAACAAT TGCAGGTTAT CGGTGAAGTC TTGTTGGAGC AAGCTTACGG
TGGTATGCGT GGTATCAAGG GTTTGGTTTG GGAAGGTTCC GTCTTGGACC CAATCGAAGG
TATCCGTTTC AGAGGTAGAA CCATCCCAGA CATCCAAAAG GAATTGCCAA AGGCTCCAGG
TGGTGAAGAA CCATTGCCAG AAGCTTTGTT CTGGTTGTTG TTGACCGGTG AAGTTCCAAC
CGAAGCTCAA ACCAGAGCTT TGTCTGAAGA ATTGGCTGCC AGATCTGCCT TGCCAAAGCA
CGTTGAAGAC TTGATCGACA GATCTCCTTC TCACTTGCAC CCAATGGCTC AATTCTCCAT
TGCCGTCACT GCTTTGGAAT CTGAATCTCA ATTCGCCAAG GCCTACGCCA AGGGTGTCAA
CAAGTCTGAA TACTGGAAAT ACACCTACGA AGACTCCATT GAATTGTTGG CCAAGTTGCC
AAACATCGCT GCCAAGATCT ACAGAAACGT CTTCCACGAC GGTAAGTTGC CAGCCCAGAT
CGACTCCAAG TTGGATTACG GTGCCAACTT GTCCAACTTG TTGGGTTTCG GTGGTAACCA
AGAATTCGTT GAGTTGATGA GATTGTATTT GACCATCCAC TCTGACCACG AAGGTGGTAA
CGTTTCTGCC CACACCACCC ACTTGGTTGG TTCGGCTTTG TCTTCTCCAT TCTTGTCATT
GGCTGCCGGT TTGAACGGTT TGGCTGGTCC ATTGCACGGA AGAGCCAACC AAGAAGTCTT
GGAATGGTTG TTCAAGTTGA GAGACGAATT GCACGGTGAC TACTCCAAGG AAAACATTGA
AAAGTACTTG TGGGAAACCC TTAACGCCGG TAGAGTCGTT CCAGGTTACG GTCACGCTGT
CTTGAGAAAG ACCGACCCAA GATACACTGC CCAGAGAGAA TTTGCTCTCA AGCACATGCC
AGACTACGAA TTGTTCAAGT TGGTCTCTAA CATCTACGAA GTCGCTCCAG GTGTCTTGAC
CAAGCACGGT AAGACCAAGA ACCCATGGCC AAATGTGGAC TCGCACTCCG GTGTCTTGTT
GCAATACTAC GGTTTGACCG AAGAATCTTT CTACACTGTC TTGTTCGGTG TCTCAAGAGC
CTTTGGTGTC TTGCCACAAT TGATTCTCGA CCGTGGTATC GGTTTGCCAA TTGAAAGACC
AAAGTCCTTC TCCACCGAAA AGTACATTGA GTTAGTCAAG AACATTAAGA ACTAGATCCA
GTTGGCTATG AGAAGACGAG ACATGGTTTA AGTTATTTTC TTTTATTTAT TATGTTTTAT
TTATTTATTG CTCCTTGCTG CTAAATTTAT TTACAGTTGC GTTGCCCAGA TGGGCCAGCT
CCAAAAATGT GAAGCTACGT AGTTATGTTC TCGATATAGT TATATGTATA AAGAAAGAAT
ACTTGTAC
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| Protein sequence | MSAFRSIQKS STLAKKAAFS SVRTYATAEP TLKARLAEIL PEKAEEVKQL KKEYGKTVIG
EVLLEQAYGG MRGIKGLVWE GSVLDPIEGI RFRGRTIPDI QKELPKAPGG EEPLPEALFW
LLLTGEVPTE AQTRALSEEL AARSALPKHV EDLIDRSPSH LHPMAQFSIA VTALESESQF
AKAYAKGVNK SEYWKYTYED SIELLAKLPN IAAKIYRNVF HDGKLPAQID SKLDYGANLS
NLLGFGGNQE FVELMRLYLT IHSDHEGGNV SAHTTHLVGS ALSSPFLSLA AGLNGLAGPL
HGRANQEVLE WLFKLRDELH GDYSKENIEK YLWETLNAGR VVPGYGHAVL RKTDPRYTAQ
REFALKHMPD YELFKLVSNI YEVAPGVLTK HGKTKNPWPN VDSHSGVLLQ YYGLTEESFY
TVLFGVSRAF GVLPQLILDR GIGLPIERPK SFSTEKYIEL VKNIKN
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