Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_83982 |
Symbol | |
ID | 4839139 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 374260 |
End bp | 375349 |
Gene Length | 1090 bp |
Protein Length | 131 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640390454 |
Product | predicted protein |
Protein accession | XP_001384731 |
Protein GI | 126136415 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1717] Ribosomal protein L32E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.958141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.216433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ACCAACATCA AAAAGTATGT TAGATCCATA TCCAAGTACA GGGGAAGTGA TATAGAGACC AGCTGGACAA CCAGCTTGTA GAAAGAAATA GAAGTCCGGC GAAGGAACGA AATCCAATGA GTCCATCACA ATTCACATCA TCGAGAAAGA TCGAAGTAAT GAGATAGAAT CAGATTGAAA TATTCAAGTA CCAAAGCCGT CAAGATATCA ATAGGAAGTA ATAGAGTTTT AATGTCGTGC CAGACTTTCA ATTAGTCGAA GTTAGATCAG ACGAAGAGAG TTCAAGATAG TCAGTTTCTA ATGAACTAGT GAACAATAAT CGAGATGAAA TCAACTGCTA TGATCAGTGA TGAGACATCA GACCAATGTT TCTTCGACAA GAGGTTGCCA ACTTCATGTT CTCATTCAAG TCATAATTTT TGAATTAAAT GTTCATTTCA TATTTTCAAA TTTTCCAATT CATCACTTCG TAAAGAATTT TCATTCAGCA TGTACACCAA CGTATATGAG GTCTTCTATA TTCTAATCTG TACTCACAAT CAAGTTAACA AAATACTAAC ATCATCTAGT GGCTGCTTCA TTACCTCACC CAAAGATTGT TAAGAAATAC AGCAAGACTT TCAAGAGACA CCACTCTGAC AGATACGCCA GAGTTTCTGA AAACTGGAGA AAGCAAAAGG GTATCGACTC TTGTGTCAGA AGAAGATTCA GAGGTACTAT CCCACAACCA AACATTGGTT ACGGTTCCAA CAAGAGAACC AAGCACTTGA CTCCATCTGG CCACAAGGTC TTCCTCGTCA AGAACGTTAA GGACTTGGAC GTTTTGTTAT TGCACACCAA GACCTACGCT GCTGAAATCG CCCACAACAT CTCCGCTAAG AACAGAGTCG AAATTGTCGC CAAGGCCAAG AAGATTGGTG TCAAGGTTAC CAACCCTAAG GGTAGAGTTG CTTTGGAAGC TTAAATTAGT TAAACTGGTT AATCATTATA TTCATTTATT GTCATCTAAC ATGTTTTAAT TAATTATGTG TTCTGGGTTC CTCTTCTTTT TTAATATATA AAAAGTTGTA AAATACATAG TCTTCAGAAG
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Protein sequence | MAASLPHPKI VKKYSKTFKR HHSDRYARVS ENWRKQKGID SCVRRRFRGT IPQPNIGYGS NKRTKHLTPS GHKVFLVKNV KDLDVLLLHT KTYAAEIAHN ISAKNRVEIV AKAKKIGVKV TNPKGRVALE A
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