Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_83594 |
Symbol | ERF2 |
ID | 4838609 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1264331 |
End bp | 1267848 |
Gene Length | 3518 bp |
Protein Length | 707 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389924 |
Product | elongation release factor |
Protein accession | XP_001384539 |
Protein GI | 150865356 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG5256] Translation elongation factor EF-1alpha (GTPase) |
TIGRFAM ID | [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.432493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.18618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA ACTACGACCA GGACAAGTTG GCCCAGGACC TCCAGAACTC CTCCATTGGC GGAAACGACC AGCAGCAACT GAACCAGTAC AAGCCTGGTA ATGCCCAGGC TTTTGTTCCA CAAGGGGGCT ACCAACAGTT CGACCAGTAT CAACAGCAAC AGAACTACTA CAACCAACAG CAGAACTACA ACCAAGGTGG TTACCAGCAG TACCAGCAGC AGCCCCAGCA GTATCAAAAC TACAACAATA ACAACCGCGG AGGATACAAC CAGCGCGGAG GATACCAGAA TACTCGTGGC GGCTACAACA ACTATAACAA TCGTGGGGGA TACCAGAACT ACAACAACTA TAACAACAGT AGAGGAGGGT ACCAAGGCTA CAACGCCAAC AACTATAACA ATAACAGAGG CTATAACCAG TACGACAATG TCGATGTTGA CGCTTCTGGT GCTCCTGCAG CCCAGGGGAT GTCTTTGGCA GATTTCCAGA AACAGAAGGA TGCCCAAGCA TCTTCATTGA ACAAGCCAGC TGTTAAGAAG ACGCTCAAGT TAGCTCCTTC TAGCGGAATC AAATTGGGCA ATGCCACCAT CAAGGTTGGA GCCAAGAAGG ATGATGTTTC TAAGGAATCC TCACCAGCCC CAACTTCTTC TGCTACCACT GCTTCATCTG CTTCTAAGGA ATCGACTCCA GTAGCTGAAA CCAAGGAAGA AGTAACTACT AACAAGACTG AAACCAAAAA GACCGAGGAA GTCAAGAAGA CCGAAGTAGT CAAAAAGGAA TCTACTCCTG TAGCTTCTAC TGGTTCTGTA TCTGCCAGGG AATCGACTCC TATCTCCACT GCTTCTTCTG TAGCTAAGGA ACAGGAAGAT GATGTTGACG AAGAAGTCGT TAAGGACTTG TTTGGTGGTA AGGACCATGT TTCCATCATC TTCATGGGCC ACGTTGATGC TGGTAAGTCT ACAATGGGAG GTAATATCTT GTACTTGACT GGTTCTGTCG ACAAGAGAAC TGTGGAAAAG TACGAAAGAG AGGCCAAAGA TGCCGGTAGA CAGGGTTGGT ACTTGTCGTG GGTGATGGAT ACCAACAAGG AAGAAAGAAA CGACGGTAAG ACCATTGAAG TTGGTAAAGC CTACTTCGAA ACAGAAAAGA GAAGATACAC CATCTTGGAT GCACCAGGGC ACAAGATGTA TGTTTCCGAG ATGATTGGTG GTGCTTCTCA AGCCGATGTA GGAATCTTGG TGATTTCTGC CAGAAAGGGT GAATATGAAA CTGGTTTTGA GAAGGGTGGT CAAACCAGAG AACACGCTCT TTTGGCTAAG ACTCAAGGTG TAAACAAGAT CATTGTCGTT GTAAACAAGA TGGATGATCC TACTGTAGGC TGGGCTGAAG AACGTTACAA CGAATGTATC ACCAAGTTGG GTGTGTTCTT AAAGGGTATT GGTTATGCCA AAGAAGACAT CGTGTTCATG CCTGTTTCCG GATACACTGG TGCAGGTTTG AAAGACAGAG TTAACCCCAA GGATTGTCCT TGGTACACTG GACCAGCTTT GTTGGAGTAC TTAGACAACA TGGAGACTGT CAACAGAAAG ATCAACGGTC CTTTCATGTT GCCAATTTCT GGAAAGATGA AGGACATGGG TACAGTAGTA GAAGGTAAGA TTGAGTCTGG TCATATAAAG AAGGGTGGCT CCTTATTGTT GATGCCTAAT AAGGTCAATG TAGAAGTCTT GACAGTCTAC AACGAAACAG AACAAGAGTG TGAAACAGCC TACAGTGGAG AACAGGTAAG ATTGAGATTG AGAGGTGTCG AAGAAGAAGA CTTGCAACCA GGTTATGTAT TGACCTCACC CAAGAACCCA GTCAAGACTG TTACCAGGTT TGAGGCTCAG ATCGCCATTG TCGAGTTGAA GTCTATCTTA TCTAACGGTT TCTCGTGTGT AATGCATTTG CATGCTGCCA TTGAAGAAGT TAAGTTCATT CAGTTGAAGC ACAAGTTGGA AAAGGGAACC AACAGAAAGT CCAAGAAGCC TCCAGCATTT GCCAAGAAGG GAATGAAGAT CATTGCCGTG TTGGAAGTTG CTGAACCAGT CTGTGCCGAG ACTTATAATG ATTACCAACA ATTAGGTAGA TTCACCTTGA GAGATCAGGG TACTACCATT GCCATCGGTA AGATCACCAA GTTGTTGTAG AAAGCTTCTA CGTGTACATA AGTGCATATT ATATACGATT GTAAGACTTT TTATAAGTAT TAAATGCATT CCTATTGTCA TCTATTAGTA GTTACTATTC TTTTTTATAC TATGGTACAA TGATTTCCCC TAGCACTAAA ATTCATTGCT GGTTTCCTCA TCTATTAATG ATTCGAATAT TTCAATAAGA TTCTCTAAAC CCTCAAGAAT GTTCTCGTCG TGACCCTGGC CATGAACAAA CTTGGCATGG GCAAAGTCTA TCATCTTCAA CGTACTTAAT GGTGCTAGAA GCTCTCTTTC TCTTCCTTCA TCTTCGCTAT CCTCTTCATC TGAATCTTCA CCAAGAAGAG GTTCAAAAAT GAGTGGATCG GCCTGATAAT ACGAGTCGTC GTCAAGAACC TTACCATCTC TGTCTAGCCA CCTAGTCAAA TCGTTTTCGT ATATAAACAA GAGAGAACCT GAAAACACCC TGATTTCATA GTCTAGCAAA CAATTATAAA GCAATTGCAA TCGCTTAAGA GTAGATTCCA AAAGTCTCTG GAGAATCTTT TTACCGTGTG GCTCAATGGT ATGGAGGTGG TGGTTGAAAA ATAGAAGTAG CCCTTGTTTT ATGTTCCTCT TGTCAAGCGA TCTGCCGAAG AACTTGTTGA ACTCAAGATA ATTGGAATTA TCGCTATCAT GAGAGATGAC ATTTACTGAA GTCAGGTTCA TATTGGGATA CAATTCTGTA GTTGGTTTCT TTTCTGAATT TCCACAATAA ACCTTCATTC CACATATTCT GAAGCTTAGA GAGCCTGTTG TTGTTGATTC GCTGACTTTC TGTAGTCTGG CAATCTTTTC TGGTGCTGTG ACAGAATCGT CCGTAAGTTT CGATCCAAGC TTGATATCCA AGATACTTGG ATAGGTGAAG CCATGGTATA AATTCTGAAG CACAATGTAC TCTTTGTCTG TATCATTTGT AGTGAGTTCA CTAACTGATT TTTGAATCAC TAGTGGATCC AGAGGGTTTA AGAAGCCTCC CTTGACATTT TCGCTAGTGG TTTCGGCATG TCCTTGTATG ATCGCATTCT GATTGCTTTC ATGAAGCTTC CCCATATATA CGGGGAGCCA ATCAACAAGT TTAGAACCTA CTGGCTTTTC TTCTAAATCG GCGCCGTCAG CAGCATCGTT ATTGTAGGTA TCGGAGTAGA AGTCTAATTC TTGTTGAGAA GTGGGTTTCA CAAAGAGAGA GCCCTCCTGA AGAGTCATTG AACCAGCATG GCCTGCTGCT TGGTGTAATG ATGGAGTGAG TCCAGAACTG TAAGGAGGAC TAGAATGATT TACGCTAG
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Protein sequence | MSENYDQDKL AQDLQNSSIG GNDQQQSNQY KPGNAQAFVP QGGYQQFDQY QQQQNYYNQQ QNYNQGYNQR GGYQNTRGGY NNYNNRGGYQ NYNNYNNSRG GYQGYNANNY NNNRGYNQYD NVDVDASGAP AAQGMSLADF QKQKDAQASS LNKPAVKKTL KLAPSSGIKL GNATIKVGAK KDDVSKESSP APTSSATTAS SASKESTPVA ETKEEVTTNK TETKKTEEVK KTEVVKKEST PVASTGSVSA RESTPISTAS SVAKEQEDDV DEEVVKDLFG GKDHVSIIFM GHVDAGKSTM GGNILYLTGS VDKRTVEKYE REAKDAGRQG WYLSWVMDTN KEERNDGKTI EVGKAYFETE KRRYTILDAP GHKMYVSEMI GGASQADVGI LVISARKGEY ETGFEKGGQT REHALLAKTQ GVNKIIVVVN KMDDPTVGWA EERYNECITK LGVFLKGIGY AKEDIVFMPV SGYTGAGLKD RVNPKDCPWY TGPALLEYLD NMETVNRKIN GPFMLPISGK MKDMGTVVEG KIESGHIKKG GSLLLMPNKV NVEVLTVYNE TEQECETAYS GEQVRLRLRG VEEEDLQPGY VLTSPKNPVK TVTRFEAQIA IVELKSILSN GFSCVMHLHA AIEEVKFIQL KHKLEKGTNR KSKKPPAFAK KGMKIIAVLE VAEPVCAETY NDYQQLGRFT LRDQGTTIAI GKITKLL
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