| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82718 |
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| Symbol | |
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| ID | 4838101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1283658 |
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| End bp | 1287884 |
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| Gene Length | 4227 bp |
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| Protein Length | 1408 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640389416 |
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| Product | predicted protein |
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| Protein accession | XP_001383531 |
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| Protein GI | 150864630 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.291981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCT CTCTCTCCCT AATAGCACAG TACTTGGCTA CTGAAAAGAG AGTGGAGATT
GCTGAAAAAT TGTCAGCAGA CATTTCTAGC AACCCCGAAG CCATCGATGC CCTCTGCCAA
ATCCTAGATG TTCTAGACTT GGAGGAGAGT CTGACAGTAT TTGCCAATAT TCTTGACTAC
TCCACAAAGA TTATATATTC AGCAACTTCA GAAGAAGAAG ACGAAGAATC TGTTGACTAT
GCTAATGTTT TGAAGTTTGC TGCAAAATTA CCCAAATTGC GCCAGCAGTT GCTCTCCAAG
ATCCTATCCA GCTTGAAGAC ATACATCCAT GAGAACCATA ACTTTATTCC CGAATTCGAC
CTGATTGTAG AAGTCCAAAA TAGTCTGGCT TCTGATTATA CCGAACCAAT CGAAATTTCT
AATGATTTAG TTTTGTCTCT TTTCAGTTTC TTGCATTCTT TCTTCGTCGC AATTCCTGAT
ATAGGAGACC TAGACCAAAG CATAGACTCA GTTCTCCTCA AGCTTTTGAG TATCAATGAT
GAGAAAATCT CGTCTATAAT CTCGAAGTTG TTACGATGGA GAATCTCATA CATCGCTGAA
AAAATTGACA ACTCGGATAT GCTCTGGAAG ATCATTTTTG CTTTGGAAAG CTCTGGAAAG
AAGTACCACA AGAGCCACGC TTTCATCTTG TGGTTGCGGT ATCTTGATAG CGGCCTTGCC
CATTATGAAG TCTACCAAAA CATCGTGAAA ACGGAACGAT ACTGGAAAGT CTTGCAAAGT
GGATTAATCA GCGACTCTCA TGAATTTAGA AAATTCTGTT TGTCTATCCT CCAGCTTTCT
GTCAAGCTGA TCAATTGCTC GTTTGAGAAT AGTATAATGT CCTGGGATTC CACCAAAAGT
TCATTGTATT TAAGCGAATG GGCCAGGTAT TGTACCTTGT TTGAAATAAT GGCTATTGAT
ACATCCTTGC ACCAGGCAGA AGCCGGTCGC AGAGATATTA CAGGGCTAAT CTCTCCTCAA
TCATTTATTC ACCCCTCGTG GGGTTTCTGT TTACTTTCTA CTGGATTCAA GGCTAGCATG
GACTCAGTTC GAAAGTTTTC TCTTGATCTT TTGTTGTCGA TTCCAGATGA GCATCTTCAT
CTTATCAAGT ATGGTTTGAA GTTCTTAGAA GAAGTCTACT TGCCCTATGC CATGTTAGCT
CCTCATTATG CTGTAAGACC TGAAGATGGT GTCAACAAGT GTATCTTCGG AGAAATCATG
ACCAAATTTA TTGCCAACTT ACTAGTTAAC CTCACGTCCG AAAAGGAGTA TCAAGATGTA
GCATTGTCGA TTTTGAACGT ATTAGAAAAC CTCAAGGAAA CTTTCGATCC TTCGAGAATC
TACATTGCTC ATGGATTACT CTTGGGTTTG TCTAATAAGA TGGTTTTGCG ATTCGATATT
CATAGGAGCG TCTTGCTCAA GATCTTTGAA GTAAATGCTG AAGGTGACTT ATTCGAAAAG
GTTATTCAGA CCATCAACTT CAGAATCTTA TTGCACTTTA AGATTACACA AAATACATTA
TTATCATTCT TTGAATTATT AAACTTGTTC ATCAGATTCA ATGGTAACCA AATTGTCAAT
GAGAATTTTA CCTTGATTCA GGAATACCTC CAGACAAATG AAATTGATAG TCAGTCATTG
TTCAGCCTCC TTAAAGATGA AAATGTCACT GGTGATCTTA AGGCTTTGAT TATAAAGGTT
CTAAACAGCA GTCAAGACCA GCTTTTATGT TATTTGAGCA ACTGTTCAGG AGAAACGATT
GCCCAAGTGA TTCAATCTTC TTCTGAACTC TCCATTTTGT CTAGTCCACA GTTGGTTGAA
TTATTCAACA AAATCATAAC CCAGAAACCA TCTTCTGTTA TTTATTCTTC ATTGGCAACT
GTTGATTTTG AAAATCTTCA AGCTCTTATC CCTTCAAAAT CTTACATTTC TGACCTCTGG
AAGTCGATTA TTTCAGAAAG TCAATCAGAC GAATTACCTG TCTTAGAGTT GATGTTACAA
AAGCATAAGT TCTTCAATAA TATCTATGCG CATTCTACTT CAGTTGTTAT GGATTTCGTC
GGTTTGGTTG AGTTAGAAAC CAAGATTCTT TCTAAATCAT CAAAACTTGT TAAGTCCGTT
AAAGAATTTT ACAAGTTGAA GGAGGAAATA TATGGTGAAT ATTATAAGAC CCTCGAAATC
ACTAGTACCA AGAGCAAGGG TTATTCGATT GAAGACATAT TGAAAGTGTT GAATTCCGAT
TCTTCTAATC ATAGAGCCAA TTTTTCCATG GTTCAACTTT TAAACAACTT CCTCTCTACT
AACAATGATA CTCAGATTGC TTCATTAAAA AAAGTTGTTA AATTCCTTAC GGACTTGTGG
AAGTCTTTAG ATTCCTCTCG ATTACAATTA AATCAAAAGG ACTTGCATGT TTTGATGATC
GATACTATCT TGCACCCTTC GTTGCTATCT CTTTCAGTAG ATGATGATGA AACTTCACAA
AATTTGTTTG AATTTGCCAT TTCTGTTCTT GAAAATGCTC AAGGTAGAAG AAGTTTACTT
CCAGCGTTAG CTAAGAATCT TTCTACTTAC CAAGTCGAAC AACATGAGAA ATTTGAAGCT
CTACCATGGG TAGTTGAAAT TTTGGTACGA GCATTCATTG TGTATCAAAT AAGGAATAAT
GTTTTTAAGT TAGAGAACAT CATTGGTGAC ATTTACGACA GAAGGATCTC TTTGACAAGT
GGCTGTGATC TTTACTCATC AGTTTATGGA CCTGAAGAAG TGAGTGCAAA AATATATTTA
ATGGCCATCT TCAACTCTGT AAAGACATCC ACATTTGCTA ACCAAATAGT GAACTTCATT
TTCGAAAATG AAAGAGAATT CTATTTCTTG CAAGTAAATA AGTCTACCGA CGGGTTTGAA
GAATGGAGAA GAATTCAATT ATTTACAATC ATTGTCTCTG TTCTTGATAT TGCTGGTTTC
GAAGATAAAT TGGATACTTT AATGGAACTT GTGGGCACTG ATCCAAGTCC TTTGGTAAGA
GTTTTCATTG AATGGATCCT TTCATTTAAC TTATTGAAGA GCAAGAAATA TGTTCAGCAG
ATTCTTGAAG ACTTGCTGAA CGAAAATGCC AATCTCAAGC CTACTGTTAT TACTTCCTAT
GAAAGAATCA TTTTCCTTAT GATACTGCAG TTGAGTCCAG AACAGGAGGT ACAAGTATTG
CAAAACTTTT TGGCCGTTAT CATCCCTGGA GCTACATCAA ATAAGGCTGT CACAAGACAT
TTCTCGTTGT CTTTGGTAGT TTCTATCTAC GAAGAAATTG AAAGCAAGAA GTTGAAAATT
GATTCTCATT TGAAGGAGAT AGTTTTTAAC ATGTACAAGA GTGCTTCTAG TTCTGAATCA
TATGGCCAAT TCAGAAGTGG GGATGCTCTC TTGTGGGATA TTAAACAAGA TTTGTCTTTG
GTGAGCATAT CTGGGGGTGT ATTAATGAGA GTTTCTGACA GAGATATTTT CGACTATATC
TCCAGACAAT CATACTTGAA ATACTTGACA CCTCAACAGA GCCAGTTTTT GAACCATGCT
ATTGGCCTCG AGCACAAGGA TTTGTGGATT AGAGATAAGC TTATTCAAAA GAGGTCAGTA
GCCAAGACTG GTACCACTTC ACAGTCACCT CTTCAAACCA AGAGTGGTGC CTGGAACACT
GTCATGGATG TGGATGAAAC TACCAGAGGT AAGGAGGTTG TGAGAAGTGA CTTAATTGTC
GTTTCTTCTT TGGTTGATAA ACCTCCCAAC TTGGGTGGTA TCTGCAGATT GTGTGATGTT
TTGGGTGCTG GGTTATTGAC GTTGAACGAT ATCAAGGTCA AGAGCCACCC ACAGTTCAAA
AACGTTGCCG TCACGGCAGA CTATTGGATG CCTATGATTG AGGTGAAGCC TGAAGACATC
AAAATGTATC TTAGAGAAAA GAAGAGGGAG GGCTACACTT TGATTGGTCT AGAACAAACC
GACAAGTCTG TTGAGTTGAA CAACGAGTTG CAGTTCCCTA AGAAGTCGTT GATTCTTTTG
GGTAGAGAAA AGGAGGGTGT TCCTGGTGAT TTGTTGGCAG AGCTTGACTT CTGTGTGGAG
ATCAAACAGG TTGGTGTGAT CAGATCGATG AACATTCAAA CTGCGACTGC CATCATTGTC
CACGCCTACT CTACACAACA TTGTTGA
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| Protein sequence | MSSSLSLIAQ YLATEKRVEI AEKLSADISS NPEAIDALCQ ILDVLDLEES STVFANILDY
STKIIYSATS EEEDEESVDY ANVLKFAAKL PKLRQQLLSK ILSSLKTYIH ENHNFIPEFD
SIVEVQNSSA SDYTEPIEIS NDLVLSLFSF LHSFFVAIPD IGDLDQSIDS VLLKLLSIND
EKISSIISKL LRWRISYIAE KIDNSDMLWK IIFALESSGK KYHKSHAFIL WLRYLDSGLA
HYEVYQNIVK TERYWKVLQS GLISDSHEFR KFCLSILQLS VKSINCSFEN SIMSWDSTKS
SLYLSEWARY CTLFEIMAID TSLHQAEAGR RDITGLISPQ SFIHPSWGFC LLSTGFKASM
DSVRKFSLDL LLSIPDEHLH LIKYGLKFLE EVYLPYAMLA PHYAVRPEDG VNKCIFGEIM
TKFIANLLVN LTSEKEYQDV ALSILNVLEN LKETFDPSRI YIAHGLLLGL SNKMVLRFDI
HRSVLLKIFE VNAEGDLFEK VIQTINFRIL LHFKITQNTL LSFFELLNLF IRFNGNQIVN
ENFTLIQEYL QTNEIDSQSL FSLLKDENVT GDLKALIIKV LNSSQDQLLC YLSNCSGETI
AQVIQSSSEL SILSSPQLVE LFNKIITQKP SSVIYSSLAT VDFENLQALI PSKSYISDLW
KSIISESQSD ELPVLELMLQ KHKFFNNIYA HSTSVVMDFV GLVELETKIL SKSSKLVKSV
KEFYKLKEEI YGEYYKTLEI TSTKSKGYSI EDILKVLNSD SSNHRANFSM VQLLNNFLST
NNDTQIASLK KVVKFLTDLW KSLDSSRLQL NQKDLHVLMI DTILHPSLLS LSVDDDETSQ
NLFEFAISVL ENAQGRRSLL PALAKNLSTY QVEQHEKFEA LPWVVEILVR AFIVYQIRNN
VFKLENIIGD IYDRRISLTS GCDLYSSVYG PEEVSAKIYL MAIFNSVKTS TFANQIVNFI
FENEREFYFL QVNKSTDGFE EWRRIQLFTI IVSVLDIAGF EDKLDTLMEL VGTDPSPLVR
VFIEWILSFN LLKSKKYVQQ ILEDLSNENA NLKPTVITSY ERIIFLMISQ LSPEQEVQVL
QNFLAVIIPG ATSNKAVTRH FSLSLVVSIY EEIESKKLKI DSHLKEIVFN MYKSASSSES
YGQFRSGDAL LWDIKQDLSL VSISGGVLMR VSDRDIFDYI SRQSYLKYLT PQQSQFLNHA
IGLEHKDLWI RDKLIQKRSV AKTGTTSQSP LQTKSGAWNT VMDVDETTRG KEVVRSDLIV
VSSLVDKPPN LGGICRLCDV LGAGLLTLND IKVKSHPQFK NVAVTADYWM PMIEVKPEDI
KMYLREKKRE GYTLIGLEQT DKSVELNNEL QFPKKSLILL GREKEGVPGD LLAELDFCVE
IKQVGVIRSM NIQTATAIIV HAYSTQHC
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