Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_80246 |
Symbol | ABC1 |
ID | 4851027 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 755011 |
End bp | 756789 |
Gene Length | 1779 bp |
Protein Length | 560 aa |
Translation table | |
GC content | 44% |
IMG OID | 640392735 |
Product | mitochondrial chaperone |
Protein accession | XP_001387784 |
Protein GI | 126274012 |
COG category | [R] General function prediction only |
COG ID | [COG0661] Predicted unusual protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.763396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTCT CCAAGAATTT CTATGAGATA ACGGTAATCG CCGCTTCCTT TTCGAAGGTG GCAGCTTCGG CTGTACGAAT CGTGGAAAAT GATTTGTGTA CTTTATATAA AACAAATCCT TTGACTCAAC CATTAAGAGA TTTGGATACC AGCAGCTCGA TGTGGCAGAC CGGAAAGTCC AAATCAGAAG AAGCCAGAGC CAGAAACGAG GCCATAGACG TTTCAATATC AAACCTAAGC AATAAAAACA TTCAAAATAA CCAAAAGAGA GGATATTCTA CTAGAGCTTA TTCTACTGTG GCCAATTCTA GAGTTAATAC TACCAGAGCC TACTCTACGA AGTCTTCCAC ATCGACCGAC CAACCACAAT CTGCACAAGA CTTCATTAAA CAGACTGACA ATACAGAATC TGTACCTACA AGAATCATTG GCGATGTAGA AAAACCGCAA GGATTCCAGA TGTCTCAGAG TGAAGTTCCC AGTACCAGAT TAGCCCGGAT CTTTCATTAC GGTACCTTGG CTGCTGGAAT GGGATTGGGG GCTGCAAAAC ACGGCTTGAA ACAGTATGCT TCTGGTAAGA AGGATCTTGA CATGAAGTCG TTGATACTAT CTCCGACGAA CATCGAACGT ATGGCTAAGA AGTTCTCGAA GATGAGAGGA GCAGCCTTGA AAGTCGGCCA GATGATGTCG TTCCAGGATT CGTCTATTTT GCCCAAAGAA ATCCAACAGA TCTTGTTGAG AGTCCAGAAT TCAGCCCACT ACATGCCTCC AGGACAATTG GAAAGAGTCA TGGTAGGTGA CTTGGGAGTC AACTGGCGTG AACGTCTCTT TGCTTCATTT GAAGACGTAC CCGTAGCTGC AGCTTCCATT GGACAAGTGC ATAATGCTGT TACGGAAGAT TTGACTCCTG TCGTAGTGAA GGTACAATAT CCGGGAGTTG TTGATTCTAT TGACTCTGAC TTGAACAACT TGTTAATGTT GTTGACTGCT TCATCGTTAT TACCACCTGG GTTATTCCTT GACAAGACGA TTGCCAATGC TAGAACTGAA TTGAAGTGGG AATGCGACTA TATCCGTGAA GCCCAGAGCT TGATTCGTTT CCGTGACATC TTGAAAGACG ACGACGTCTT CGAAGTTCCT CGTGTTTTCC ACAACTTGTG TGGTGAGCAT GTGTTAACCA TGGAGAGAAT GAGAGGAATT GAAATTGTCA AGGGTAACTG GGATCAGGCT ACCAATGACT GGATTGCAAC AAATATCATG AGATTGTGCT TGTTGGAAAT CAAGAAATTC AGGTTCATGC AAACTGATCC TAACTGGGCT AACTTCTTGT ACAACGAACA AACGAAGAAA ATCGAGTTGT TGGATTTTGG AGCTTCCCGC GACTTTGGAG AAGACTTCAT CGACAACTAC GTATCTGTGC TTCGAGCAGC TTGTAAGAAA GACAGAGAAG GTGTAGAACA TTTCTCAAAG AAGTTGGGCT ACTTGACCGG TTTGGAGTCG CCTCAGATGG TCAGAGCTCA CGTCGATTCA GTGATGGTTT TGGGTGAAGC ATTTTCGCCC GTGGACAACA AAGGTAAGCC TTTTGACTTC AACAACCAGA CGATTACCGA CAGAGTCAGA GGCAACATCG GGTTAATGTT GAACGAGAGA TTGGCACCAC CTCCAGAAGA AACCTACTCC TTGCACAGAA AGTTGAGTGG AGTGTTTTTG TTATGTGCGA GATTGAAGGC CACGGTGCCT TGCGAGGACT TGTTCAGAGA GATCATTGGT TTTGACTAG
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Protein sequence | MSFSKNFYEI TVIAASFSKV AASAVRIVEN DLCTLYKTNP LTQPLRDLDT SSSMWQTGKS KSEEARARNE AIDVSISNLS NKNIQNNQKR GYSTRAYSTT DNTESVPTRI IGDVEKPQGF QMSQSEVPST RLARIFHYGT LAAGMGLGAA KHGLKQYASG KKDLDMKSLI LSPTNIERMA KKFSKMRGAA LKVGQMMSFQ DSSILPKEIQ QILLRVQNSA HYMPPGQLER VMVGDLGVNW RERLFASFED VPVAAASIGQ VHNAVTEDLT PVVVKVQYPG VVDSIDSDLN NLLMLLTASS LLPPGLFLDK TIANARTELK WECDYIREAQ SLIRFRDILK DDDVFEVPRV FHNLCGEHVL TMERMRGIEI VKGNWDQATN DWIATNIMRL CLLEIKKFRF MQTDPNWANF LYNEQTKKIE LLDFGASRDF GEDFIDNYVS VLRAACKKDR EGVEHFSKKL GYLTGLESPQ MVRAHVDSVM VLGEAFSPVD NKGKPFDFNN QTITDRVRGN IGLMLNERLA PPPEETYSLH RKLSGVFLLC ARLKATVPCE DLFREIIGFD
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