Gene PICST_77100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_77100 
Symbol 
ID4837736 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp624017 
End bp625100 
Gene Length1084 bp 
Protein Length130 aa 
Translation table12 
GC content39% 
IMG OID640389051 
Productpredicted protein 
Protein accessionXP_001383400 
Protein GI126133751 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.289517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.746145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTTTCGAAAC AAGAGTATGT TGCCTAGTCT GTAACCACAA GTCAACATGG ATGCTCTGCT 
TCCGCTTTCG ATTTCATATC TCCTCCAAAT GGGTAAGAAT CTTGTCGTCT TGTAGAAAGT
TGAACAACTT TTCCACTCCT GGTAAGGAAT GGAGGCTGTT TGGATTTTTA TTTGGCTCAC
TAGTTTTCAA CAACTGGTAG TCTGAGACGT TAGATACCTT GCCCGTTTTC TGGCTCATGA
ATCCTTCTAA AGGACACTCA TGTGGCTTTG GTTAACAATA ACTACCATTT ATCTACTAGT
ACTAGTATAA TGGTGGTTTT TGTATGAAAT CGTTTCCTTA TACTAACTTT TAATCTTGTA
GCCATAATAG CAATTTCATA CAATGACCAG AACTTCTGTA TTAGCCGATG CCTTGAACGC
CATCAACAAC GCCGAAAAGA CCGGTAAGCG TCAAGTTTTG ATCAGACCAT CCTCCAAGGT
CATCATCAAG TTTTTGACTG TCATGCAAAG ACACGGTATG TTTTCTTGAT AGAAAATCTA
AGAATCTTAT TTCACTAGTT CCAAATTTTT GTCTAGTTCT TTTAATTTAT ATAGATCCCC
GAATTGATAA CTGGATGGAT TGATCGGTGT TCAGTCCCTT TCTGTCTTTT AAGTATTCGG
GAGAATAAGT GGGAAATGCT TCTTACACGG TGCTGATATG CCAATTATCT TTTGCCGTTT
ACTTTTCCTT AACATCGGGA CTACAAAAAT GGATTCTTGG TTTTGTTACA GAACTTATTA
CTAACATTTT TAGGTTACAT CGGTGAATTC GAATACATCG ACGACCACAG ATCGGGAAAG
ATTGTTGTGC AATTGACCGG TAGATTGAAC AAGTGTGGTG TCATTTCTCC AAGATTCAAC
GTCAAGATCA ACGACATCGA GAGATGGACT GACAACTTGT TGCCAGCCAG ACAGTTCGGT
TTCGTCATCT TGACTACCTC TGCCGGTATC ATGGACCATG AAGAAGCCAG AAGAAAGCAT
GTTTCTGGTA AGATCTTGGG TTTCGTATAC TAAAAGGGTA TATTTGTGTA TAATAATAAA
GGAG
 
Protein sequence
MTRTSVLADA LNAINNAEKT GKRQVLIRPS SKVIIKFLTV MQRHGYIGEF EYIDDHRSGK 
IVVQLTGRLN KCGVISPRFN VKINDIERWT DNLLPARQFG FVILTTSAGI MDHEEARRKH
VSGKILGFVY