Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_77100 |
Symbol | |
ID | 4837736 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 624017 |
End bp | 625100 |
Gene Length | 1084 bp |
Protein Length | 130 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640389051 |
Product | predicted protein |
Protein accession | XP_001383400 |
Protein GI | 126133751 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0096] Ribosomal protein S8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.289517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.746145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTTTCGAAAC AAGAGTATGT TGCCTAGTCT GTAACCACAA GTCAACATGG ATGCTCTGCT TCCGCTTTCG ATTTCATATC TCCTCCAAAT GGGTAAGAAT CTTGTCGTCT TGTAGAAAGT TGAACAACTT TTCCACTCCT GGTAAGGAAT GGAGGCTGTT TGGATTTTTA TTTGGCTCAC TAGTTTTCAA CAACTGGTAG TCTGAGACGT TAGATACCTT GCCCGTTTTC TGGCTCATGA ATCCTTCTAA AGGACACTCA TGTGGCTTTG GTTAACAATA ACTACCATTT ATCTACTAGT ACTAGTATAA TGGTGGTTTT TGTATGAAAT CGTTTCCTTA TACTAACTTT TAATCTTGTA GCCATAATAG CAATTTCATA CAATGACCAG AACTTCTGTA TTAGCCGATG CCTTGAACGC CATCAACAAC GCCGAAAAGA CCGGTAAGCG TCAAGTTTTG ATCAGACCAT CCTCCAAGGT CATCATCAAG TTTTTGACTG TCATGCAAAG ACACGGTATG TTTTCTTGAT AGAAAATCTA AGAATCTTAT TTCACTAGTT CCAAATTTTT GTCTAGTTCT TTTAATTTAT ATAGATCCCC GAATTGATAA CTGGATGGAT TGATCGGTGT TCAGTCCCTT TCTGTCTTTT AAGTATTCGG GAGAATAAGT GGGAAATGCT TCTTACACGG TGCTGATATG CCAATTATCT TTTGCCGTTT ACTTTTCCTT AACATCGGGA CTACAAAAAT GGATTCTTGG TTTTGTTACA GAACTTATTA CTAACATTTT TAGGTTACAT CGGTGAATTC GAATACATCG ACGACCACAG ATCGGGAAAG ATTGTTGTGC AATTGACCGG TAGATTGAAC AAGTGTGGTG TCATTTCTCC AAGATTCAAC GTCAAGATCA ACGACATCGA GAGATGGACT GACAACTTGT TGCCAGCCAG ACAGTTCGGT TTCGTCATCT TGACTACCTC TGCCGGTATC ATGGACCATG AAGAAGCCAG AAGAAAGCAT GTTTCTGGTA AGATCTTGGG TTTCGTATAC TAAAAGGGTA TATTTGTGTA TAATAATAAA GGAG
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Protein sequence | MTRTSVLADA LNAINNAEKT GKRQVLIRPS SKVIIKFLTV MQRHGYIGEF EYIDDHRSGK IVVQLTGRLN KCGVISPRFN VKINDIERWT DNLLPARQFG FVILTTSAGI MDHEEARRKH VSGKILGFVY
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