Gene PICST_73324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_73324 
SymbolRPS16 
ID4840308 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp394078 
End bp395173 
Gene Length1096 bp 
Protein Length142 aa 
Translation table12 
GC content38% 
IMG OID640391623 
Product40S ribosomal protein S16 
Protein accessionXP_001385427 
Protein GI126137808 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.954213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0669518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC AATCTGTTCA AGTATGTAAT GAGCACAGCA TATAGGAGAA CTAGACGAAC 
AAAAGCATCC AACCCATGTA TCTCAGACGT CGTTGTAGCC TCTAGACGTT GGAGGATTGT
CATCAGGAAT AGAAAGAGAA CCAAAACCCA AGATTTACCA CAGTCATTAT ATCCAACAGA
CCAGTCACCT ATCAAACGAA TGAAAATATA GACGTAGAAG TGGAAGTTTC GATAGAAATG
ACAAACTGAA TGCAAACTAG ATTATTCAAC AAGCGCAGAT TTAAGTTTCA ATATCCCTTA
GCCTTGAAAA ATGAAGAATT CAATATGGGA TAGGGCCATC TCTGATGGTG GACTACGATC
GACCATCAAC TCCGTAAATG TTTTGAAAAA TTAAAGAGAG AAACAAATAT TGTATGCCAG
GGTTAACATT CACCTACTTC TAATCTAATC AATTCCAATA CTCCTCATAA TCAAGCTAAA
TGTTCGAAGT TCCTCCTTGT CATCCTATTT TATTGAACCA ATACTAACAT CTATCTAGAC
TTTTGGTAAG AAGAAGACCG CTACTGCCGT TGCCCACGTC AAGGCCGGTA AGGGTTTAAT
CAAAATCAAC GGTGCCCCAA TCACCTTGGT CCAACCAGAA ATCTTAAGAT TCAAAGTTTA
CGAACCATTG ACCTTAGTCG GTGTTGAAAA GTTCCAAAAT ATTGATATCA GAGTCAAGGT
CACCGGTGGT GGTCACGTTT CTCAAGTTTA CGCCATCAGA CAAGCTATTG CTAAGGGTTT
GATTGCTTAC CACCAAAAAT ACGTCGACGA AGCTTCCAAG AACGAATTGA AGAAGATCTT
CGCTTCTTAC GACAAGACCT TGTTGGTTGC TGACTCCAGA AGAATGGAAC CAAAGAAGTT
CGGTGGTCGT GGTGCCAGAG CCAGATTCCA AAAGTCTTAC CGTTAGAAGA GCTATCATAT
TATTACAACA TCGATCCGTT CGTTGCATAT ACTATATTAT TCTACAGATC ATGAATATTG
TTTATTAGGT ACTCGAGGTT TATTAATATC TTAACTTTTT TAATACAACG TCAAAAATAC
AAATTTATCA AATTTG
 
Protein sequence
MSTQSVQTFG KKKTATAVAH VKAGKGLIKI NGAPITLVQP EILRFKVYEP LTLVGVEKFQ 
NIDIRVKVTG GGHVSQVYAI RQAIAKGLIA YHQKYVDEAS KNELKKIFAS YDKTLLVADS
RRMEPKKFGG RGARARFQKS YR