Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_73324 |
Symbol | RPS16 |
ID | 4840308 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 394078 |
End bp | 395173 |
Gene Length | 1096 bp |
Protein Length | 142 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640391623 |
Product | 40S ribosomal protein S16 |
Protein accession | XP_001385427 |
Protein GI | 126137808 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0103] Ribosomal protein S9 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.954213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0669518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCC AATCTGTTCA AGTATGTAAT GAGCACAGCA TATAGGAGAA CTAGACGAAC AAAAGCATCC AACCCATGTA TCTCAGACGT CGTTGTAGCC TCTAGACGTT GGAGGATTGT CATCAGGAAT AGAAAGAGAA CCAAAACCCA AGATTTACCA CAGTCATTAT ATCCAACAGA CCAGTCACCT ATCAAACGAA TGAAAATATA GACGTAGAAG TGGAAGTTTC GATAGAAATG ACAAACTGAA TGCAAACTAG ATTATTCAAC AAGCGCAGAT TTAAGTTTCA ATATCCCTTA GCCTTGAAAA ATGAAGAATT CAATATGGGA TAGGGCCATC TCTGATGGTG GACTACGATC GACCATCAAC TCCGTAAATG TTTTGAAAAA TTAAAGAGAG AAACAAATAT TGTATGCCAG GGTTAACATT CACCTACTTC TAATCTAATC AATTCCAATA CTCCTCATAA TCAAGCTAAA TGTTCGAAGT TCCTCCTTGT CATCCTATTT TATTGAACCA ATACTAACAT CTATCTAGAC TTTTGGTAAG AAGAAGACCG CTACTGCCGT TGCCCACGTC AAGGCCGGTA AGGGTTTAAT CAAAATCAAC GGTGCCCCAA TCACCTTGGT CCAACCAGAA ATCTTAAGAT TCAAAGTTTA CGAACCATTG ACCTTAGTCG GTGTTGAAAA GTTCCAAAAT ATTGATATCA GAGTCAAGGT CACCGGTGGT GGTCACGTTT CTCAAGTTTA CGCCATCAGA CAAGCTATTG CTAAGGGTTT GATTGCTTAC CACCAAAAAT ACGTCGACGA AGCTTCCAAG AACGAATTGA AGAAGATCTT CGCTTCTTAC GACAAGACCT TGTTGGTTGC TGACTCCAGA AGAATGGAAC CAAAGAAGTT CGGTGGTCGT GGTGCCAGAG CCAGATTCCA AAAGTCTTAC CGTTAGAAGA GCTATCATAT TATTACAACA TCGATCCGTT CGTTGCATAT ACTATATTAT TCTACAGATC ATGAATATTG TTTATTAGGT ACTCGAGGTT TATTAATATC TTAACTTTTT TAATACAACG TCAAAAATAC AAATTTATCA AATTTG
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Protein sequence | MSTQSVQTFG KKKTATAVAH VKAGKGLIKI NGAPITLVQP EILRFKVYEP LTLVGVEKFQ NIDIRVKVTG GGHVSQVYAI RQAIAKGLIA YHQKYVDEAS KNELKKIFAS YDKTLLVADS RRMEPKKFGG RGARARFQKS YR
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