Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_72814 |
Symbol | |
ID | 4839404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1169716 |
End bp | 1170628 |
Gene Length | 913 bp |
Protein Length | 244 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390719 |
Product | predicted protein |
Protein accession | XP_001384900 |
Protein GI | 126136753 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.146555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTTCAAATAA ACTAGTGTCG CTGTGTATGG GCGGCAACCT CATACTGCTA CCATGCCTTC ACTATTCCAC AAATACAATA ATCTTCTTAA GAAGTACCCC TTCAGAACCA ATATGGTTAC TACGGGGGCA TTCTTTGGTA TCGGAGACGC TTGTGCCCAG TACCTTTTCC CACACAAGGA TATTTACACT GTACTAAACG ACAAAGGAGA AGAAGTAGAT GAAATACGCT ATCATCCCTA TAACTTTCCC CGAACTGCCC GAGCCATGAT CTACGGATCA TTCTTCTTTG CACCCATTAG TGTGATGTGG CATGGAAAGA CGTTACCCCG ATTTAAGAAT CCCTTCGTGT CTGCCACTCG TCGTAACGCC ATGAAAAACG ATCCCAAATT ATACCCCAGA TTGCATTTTT ATGACACGTT TTTCCGGTTG TCTATCGATC AACTCTTAAT TCCTGGGTTT GTGTGGATCC CGCTATACAA CACAGTGATG GTGACACTAG CCATGCATGA ACATCCGTTT GATTTGGTTT ACGACAAGTT GCACAAGAAC TGGTGGAACG TTTTGAAGGC TAGTTGGACT GTCTGGCCCA TGTTCCAGAT GGTGAACTTG TACTTTGTAC CCGTACATTT GAGAATCGTT ACAGCTAATG TATGGTCCAT AGGCTGGAAC GGGTTCTTGT CATTTGTTCA CAATACACAA GGGCATGGCA AGGGTAGCGG AAAGTTATTG GAAGAAATGG TGGATATAGA AGACGACGAC GAAGAGGTTA CAATGGTGTA TGATTGAGGA ATAGAATTTA TTAGACATCG AGAATGAACC CCAATAGAAA GCAGCATGTT CATTCAGAAA ATTGCATATT CAGAATATCA TATTTAGTGT AATTATAGTC AGTATATTCC CCTGGGAGAT ACG
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Protein sequence | MPSLFHKYNN LLKKYPFRTN MVTTGAFFGI GDACAQYLFP HKDIYTVLND KGEEVDEIRY HPYNFPRTAR AMIYGSFFFA PISVMWHGKT LPRFKNPFVS ATRRNAMKND PKLYPRLHFY DTFFRLSIDQ LLIPGFVWIP LYNTVMVTLA MHEHPFDLVY DKLHKNWWNV LKASWTVWPM FQMVNLYFVP VHLRIVTANV WSIGWNGFLS FVHNTQGHGK GSGKLLEEMV DIEDDDEEVT MVYD
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