Gene PICST_72814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_72814 
Symbol 
ID4839404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1169716 
End bp1170628 
Gene Length913 bp 
Protein Length244 aa 
Translation table12 
GC content42% 
IMG OID640390719 
Productpredicted protein 
Protein accessionXP_001384900 
Protein GI126136753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.146555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTTCAAATAA ACTAGTGTCG CTGTGTATGG GCGGCAACCT CATACTGCTA CCATGCCTTC 
ACTATTCCAC AAATACAATA ATCTTCTTAA GAAGTACCCC TTCAGAACCA ATATGGTTAC
TACGGGGGCA TTCTTTGGTA TCGGAGACGC TTGTGCCCAG TACCTTTTCC CACACAAGGA
TATTTACACT GTACTAAACG ACAAAGGAGA AGAAGTAGAT GAAATACGCT ATCATCCCTA
TAACTTTCCC CGAACTGCCC GAGCCATGAT CTACGGATCA TTCTTCTTTG CACCCATTAG
TGTGATGTGG CATGGAAAGA CGTTACCCCG ATTTAAGAAT CCCTTCGTGT CTGCCACTCG
TCGTAACGCC ATGAAAAACG ATCCCAAATT ATACCCCAGA TTGCATTTTT ATGACACGTT
TTTCCGGTTG TCTATCGATC AACTCTTAAT TCCTGGGTTT GTGTGGATCC CGCTATACAA
CACAGTGATG GTGACACTAG CCATGCATGA ACATCCGTTT GATTTGGTTT ACGACAAGTT
GCACAAGAAC TGGTGGAACG TTTTGAAGGC TAGTTGGACT GTCTGGCCCA TGTTCCAGAT
GGTGAACTTG TACTTTGTAC CCGTACATTT GAGAATCGTT ACAGCTAATG TATGGTCCAT
AGGCTGGAAC GGGTTCTTGT CATTTGTTCA CAATACACAA GGGCATGGCA AGGGTAGCGG
AAAGTTATTG GAAGAAATGG TGGATATAGA AGACGACGAC GAAGAGGTTA CAATGGTGTA
TGATTGAGGA ATAGAATTTA TTAGACATCG AGAATGAACC CCAATAGAAA GCAGCATGTT
CATTCAGAAA ATTGCATATT CAGAATATCA TATTTAGTGT AATTATAGTC AGTATATTCC
CCTGGGAGAT ACG
 
Protein sequence
MPSLFHKYNN LLKKYPFRTN MVTTGAFFGI GDACAQYLFP HKDIYTVLND KGEEVDEIRY 
HPYNFPRTAR AMIYGSFFFA PISVMWHGKT LPRFKNPFVS ATRRNAMKND PKLYPRLHFY
DTFFRLSIDQ LLIPGFVWIP LYNTVMVTLA MHEHPFDLVY DKLHKNWWNV LKASWTVWPM
FQMVNLYFVP VHLRIVTANV WSIGWNGFLS FVHNTQGHGK GSGKLLEEMV DIEDDDEEVT
MVYD