| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_71824 |
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| Symbol | RPT6 |
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| ID | 4838527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1105033 |
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| End bp | 1106307 |
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| Gene Length | 1275 bp |
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| Protein Length | 402 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389842 |
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| Product | protease regulatory subunit 8 homolog (SUG1 protein) (CIM3 protein) (TAT-binding protein TBY1) |
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| Protein accession | XP_001384165 |
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| Protein GI | 126135282 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTTTTATAT ATATAAACGA TATAAAAGAA CAGAAGCAAA ATGTCTGTCG TATCAATCGG
CAAGCCTTAC GTGCACGAAG GTGGGATTCG TCCATACTTT GAACAACAGA TACAAGACAC
AGAGATCAAG ATACAGCAAA CGACACAGAA CTTGAGACGG TTGGAGGCAC AGAGAAACAA
GTTGAATAAC AAAGTAAGAC AGTTAAAAGA CGAGTTGAGA TTGTTGCAAG AACCGGGCTC
TTATGTTGGG GAAGTTGTCA AAGTGATGGG ATTGAAGAAG GTATTGGTGA AGATTCATCC
TGAGGGTAAA TACATTGTCA ATGTAACCAA GGATATCGAC ATCAAGAAGT TGACTCCATC
TATCAGAGTG TGCTTGAAGT CAGACTCGTA CGACTTGCAC AAGATTTTAC CCAACAAAGT
GGATCCGTTG GTTTCATTGA TGATGGTGGA GAAGGTTCCC GACTCCACTT ACGATATGGT
GGGTGGCTTA GATAAGCAGA TCAAAGAGAT CAAAGAGGTG ATTGAGTTGC CAGTGAAGCA
TCCAGAGTTG TTTGAGAGTT TGGGAATTGC CCAGCCTAAA GGTGTTATTC TTTACGGTCC
TCCTGGAACC GGTAAGACAT TGTTGGCCAG AGCGGTGGCT CATCACACCG AGTGTAAGTT
CATCAGAGTT TCTGGTTCTG AGTTGGTGCA AAAGTATATT GGTGAAGGTT CGCGTATGGT
TCGTGAGTTA TTTGTAATGG CTAGAGAACA CGCCCCATCT ATCATATTTA TGGACGAAAT
CGATTCCATT GGTTCGTCAC GTGTAGAAGG CTCATCTGGA GGAGACTCCG AGGTGCAGAG
AACTATGTTA GAATTGTTAA ACCAGTTGGA CGGGTTCGAA AGCTCCAAAG ACATCAAGAT
CATCATGGCT ACTAACAGAC TTGATATCTT GGACCCTGCA TTGTTGAGAC CTGGTAGAAT
CGACAGGAAG ATCGAGTTCC CAGCACCTAC AGTAGCTGCC AGAACCGACA TCTTGAAGAT
TCATTCTAGA TCCATGAACT TGACGAGAGG CATTGACTTG AGAAAGATAG CCGAGAAGAT
GAACGGGTGT TCAGGTGCAG ATGTCAAGGG TGTTTGTACC GAAGCTGGTA TGTACGCATT
GAGAGAAAGA AGAATCCACA TTACGCAAGA AGACTTTGAG TTGGCTGTTG CCAAGGTGAT
GTCGAAGAAC GACGAGGGAG CTGTGTCGTT GGCTAAGTTA TTCAAGTAGT CAATGTATCA
ATATAAATTA TCTCG
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| Protein sequence | MSVVSIGKPY VHEGGIRPYF EQQIQDTEIK IQQTTQNLRR LEAQRNKLNN KVRQLKDELR
LLQEPGSYVG EVVKVMGLKK VLVKIHPEGK YIVNVTKDID IKKLTPSIRV CLKSDSYDLH
KILPNKVDPL VSLMMVEKVP DSTYDMVGGL DKQIKEIKEV IELPVKHPEL FESLGIAQPK
GVILYGPPGT GKTLLARAVA HHTECKFIRV SGSELVQKYI GEGSRMVREL FVMAREHAPS
IIFMDEIDSI GSSRVEGSSG GDSEVQRTML ELLNQLDGFE SSKDIKIIMA TNRLDILDPA
LLRPGRIDRK IEFPAPTVAA RTDILKIHSR SMNLTRGIDL RKIAEKMNGC SGADVKGVCT
EAGMYALRER RIHITQEDFE LAVAKVMSKN DEGAVSLAKL FK
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