Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_69488 |
Symbol | MUP1.1 |
ID | 4851797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2851857 |
End bp | 2853682 |
Gene Length | 1826 bp |
Protein Length | 551 aa |
Translation table | |
GC content | 42% |
IMG OID | 640393505 |
Product | high affinity methionine permease |
Protein accession | XP_001387110 |
Protein GI | 126275630 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.649926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCTCA CTGACTTCTA CAAAACAAAC TCGACTAACG AGAAGCACAA TGAGCAGCCA GGCTCGGCCA GTTTAACTTC GGCCTCTGAT AACGAAGCTG CCGTCATCCA AATTGATCAA AACAAGAAGG AAATTGGTTA TGTTTCGGCC ACCTTTTTGA TGCTTAACAG AATGTTGGGT GCCGGTGTGT TTTCCACTGG TTCCACTATT TTCGCCCTTT CTGGATCTGT TGGAACTGCC TTGATGATGT GGTTCGCAGG TACTATCATT GCACTTTCCG GTTTGTTGGT GTATATGGAA TTGGGATCTG CCTTGCCTAG AAACGGTGGT GAAAAGAACT ATTTAGAATA CTTGTTCAAG AAGCCTAAAT TCTTGGTCAC TGCCATGTAC GCTTCCTATG TTTTCTTCTT GGGTTGGGCT GCTGGTAACT CTATTGTCGT CGGTGAATAT ATTTTGAACG CCGCAGGCAA GGAAGTTACT CAATGGAACT CCAGAGGTAT TGGTATTGCT GTCATTACCT TTGCCTTCTT AATCAATGCC ATCAATGTTA AGGCTGGTTT GTTCTTGGCC AACTCCTTAG GTGTCTTCAA GGTGTTCATT GTGTTGTTCA TCACAGTCAC AGGTTGGGTT GCCCTTGGTG GTGGTATCAA GACTAACAAC TTCCACCCTA CTGGAAACTT CCACAATGCT TTCTCTGGTG AAACCCCTAC TGCTTTCGGT ATTGTTAATG CTTTGTACAA TGTCATTTGG TCGTATGTGG GTTACTCCAA TGCTAACTAT GCTTTGGGTG AAATCAAGAA CCCTGTCAAA GTCTTGAGAG TCGCTGCTCC AACCGCTTTT ATCTTCTTGG GTATTATCTA TATGTTTGTT AACATTGCTT ACTTTGCTGT TGTTCCAAAG GAAGAAATCG CTGGTTCCGG TAGAATTTTA GCTGCCTCCT TCTTCAAGTT CGCTTTTGGT GACTCTGCTG AAAAGGCTGC CTCTGTATTT GTCGCTTTGT CTGCCTGGGC CAACGTCATG TCTGTCATTT TCTCCCAGGG TAGAATTGTT CAACAATTGG GTCGTGAAGG TGCCTTGCCA TTCTCGAGAT TCTTTGCTAC TTCCAGACCT TTCAGCACTC CATTTGTTGG TTTGATGGAA CATTGGATTG TCTGTATCAT CACCATTGTT GCTCCACCTC CAGGTGATGC TTACAACTTT GTGTTGAACT TGATTTCTTA CCCATTGAAC GTTGTCAACA CTGTTCTTGC CGGTGGATTG CTCTATGTCT ATTACCAAAG ATACAGAGGT TTGACCGAAT GGAACCCTCC TATTAAGGCC ACTTTGCCTG TTGTCGCTTT CTTCTTCTTA GCTTCCTTGT ACTTGATTGT TGCTCCTTAC ATTCCTCCAG TGAAGGGACA AACTGTCTAC AATTCTTTGC CATACTGGAT CCATGCCGTT GTCACTTGGG GTGTCTTTGG TATCGGTTTA GTTTACTGGA TTGTCTGGGC CAAGATCCTT CCAAAAATCG GTAACTACAC CTTGGTTTCA AAGGAAATCA TTGGTGAAGA CGGTTTCTGG AGAAACAAAA TCTACAAGAT CGCAAATGAT GGTTCCAATA GGGAAGAAAT CGAAAATGAT GGTAACGACA GTTCCGATAC TAAGGGCATA AATTAGAAAA ACCCTTCGGT AAGTCATTCA ATGGCTGCTA CAACTACAGG GTACTAATCA TATTTAATCA TGATATAATA GCTGGGCATT TATAAAGTTT ATTTCAACAT ACTTTTCTTA ATAGTCATTT AATTCAACTT CAAGACGTTT ACTTCATAAT AGATTATCTT TTATTT
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Protein sequence | MGLTDFYKTN STNEKHNEQP GSASLTSASD NEAAVIQIDQ NKKEIGYVSA TFLMLNRMLG AGVFSTGSTI FALSGSVGTA LMMWFAGTII ALSGLLVYME LGSALPRNGG EKNYLEYLFK KPKFLVTAMY ASYVFFLGWA AGNSIVVGEY ILNAAGKEVT QWNSRGIGIA VITFAFLINA INVKAGLFLA NSLGVFKVFI VLFITVTGWV ALGGGIKTNN FHPTGNFHNA FSGETPTAFG IVNALYNVIW SYVGYSNANY ALGEIKNPVK VLRVAAPTAF IFLGIIYMFV NIAYFAVVPK EEIAGSGRIL AASFFKFAFG DSAEKAASVF VALSAWANVM SVIFSQGRIV QQLGREGALP FSRFFATSRP FSTPFVGLME HWIVCIITIV APPPGDAYNF VLNLISYPLN VVNTVLAGGL LYVYYQRYRG LTEWNPPIKA TLPVVAFFFL ASLYLIVAPY IPPVKGQTVY NSLPYWIHAV VTWGVFGIGL VYWIVWAKIL PKIGNYTLVS KEIIGEDGFW RNKIYKIAND GSNREEIEND GNDSSDTKGI N
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