Gene PICST_69488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_69488 
SymbolMUP1.1 
ID4851797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2851857 
End bp2853682 
Gene Length1826 bp 
Protein Length551 aa 
Translation table 
GC content42% 
IMG OID640393505 
Producthigh affinity methionine permease 
Protein accessionXP_001387110 
Protein GI126275630 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.649926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTCA CTGACTTCTA CAAAACAAAC TCGACTAACG AGAAGCACAA TGAGCAGCCA 
GGCTCGGCCA GTTTAACTTC GGCCTCTGAT AACGAAGCTG CCGTCATCCA AATTGATCAA
AACAAGAAGG AAATTGGTTA TGTTTCGGCC ACCTTTTTGA TGCTTAACAG AATGTTGGGT
GCCGGTGTGT TTTCCACTGG TTCCACTATT TTCGCCCTTT CTGGATCTGT TGGAACTGCC
TTGATGATGT GGTTCGCAGG TACTATCATT GCACTTTCCG GTTTGTTGGT GTATATGGAA
TTGGGATCTG CCTTGCCTAG AAACGGTGGT GAAAAGAACT ATTTAGAATA CTTGTTCAAG
AAGCCTAAAT TCTTGGTCAC TGCCATGTAC GCTTCCTATG TTTTCTTCTT GGGTTGGGCT
GCTGGTAACT CTATTGTCGT CGGTGAATAT ATTTTGAACG CCGCAGGCAA GGAAGTTACT
CAATGGAACT CCAGAGGTAT TGGTATTGCT GTCATTACCT TTGCCTTCTT AATCAATGCC
ATCAATGTTA AGGCTGGTTT GTTCTTGGCC AACTCCTTAG GTGTCTTCAA GGTGTTCATT
GTGTTGTTCA TCACAGTCAC AGGTTGGGTT GCCCTTGGTG GTGGTATCAA GACTAACAAC
TTCCACCCTA CTGGAAACTT CCACAATGCT TTCTCTGGTG AAACCCCTAC TGCTTTCGGT
ATTGTTAATG CTTTGTACAA TGTCATTTGG TCGTATGTGG GTTACTCCAA TGCTAACTAT
GCTTTGGGTG AAATCAAGAA CCCTGTCAAA GTCTTGAGAG TCGCTGCTCC AACCGCTTTT
ATCTTCTTGG GTATTATCTA TATGTTTGTT AACATTGCTT ACTTTGCTGT TGTTCCAAAG
GAAGAAATCG CTGGTTCCGG TAGAATTTTA GCTGCCTCCT TCTTCAAGTT CGCTTTTGGT
GACTCTGCTG AAAAGGCTGC CTCTGTATTT GTCGCTTTGT CTGCCTGGGC CAACGTCATG
TCTGTCATTT TCTCCCAGGG TAGAATTGTT CAACAATTGG GTCGTGAAGG TGCCTTGCCA
TTCTCGAGAT TCTTTGCTAC TTCCAGACCT TTCAGCACTC CATTTGTTGG TTTGATGGAA
CATTGGATTG TCTGTATCAT CACCATTGTT GCTCCACCTC CAGGTGATGC TTACAACTTT
GTGTTGAACT TGATTTCTTA CCCATTGAAC GTTGTCAACA CTGTTCTTGC CGGTGGATTG
CTCTATGTCT ATTACCAAAG ATACAGAGGT TTGACCGAAT GGAACCCTCC TATTAAGGCC
ACTTTGCCTG TTGTCGCTTT CTTCTTCTTA GCTTCCTTGT ACTTGATTGT TGCTCCTTAC
ATTCCTCCAG TGAAGGGACA AACTGTCTAC AATTCTTTGC CATACTGGAT CCATGCCGTT
GTCACTTGGG GTGTCTTTGG TATCGGTTTA GTTTACTGGA TTGTCTGGGC CAAGATCCTT
CCAAAAATCG GTAACTACAC CTTGGTTTCA AAGGAAATCA TTGGTGAAGA CGGTTTCTGG
AGAAACAAAA TCTACAAGAT CGCAAATGAT GGTTCCAATA GGGAAGAAAT CGAAAATGAT
GGTAACGACA GTTCCGATAC TAAGGGCATA AATTAGAAAA ACCCTTCGGT AAGTCATTCA
ATGGCTGCTA CAACTACAGG GTACTAATCA TATTTAATCA TGATATAATA GCTGGGCATT
TATAAAGTTT ATTTCAACAT ACTTTTCTTA ATAGTCATTT AATTCAACTT CAAGACGTTT
ACTTCATAAT AGATTATCTT TTATTT
 
Protein sequence
MGLTDFYKTN STNEKHNEQP GSASLTSASD NEAAVIQIDQ NKKEIGYVSA TFLMLNRMLG 
AGVFSTGSTI FALSGSVGTA LMMWFAGTII ALSGLLVYME LGSALPRNGG EKNYLEYLFK
KPKFLVTAMY ASYVFFLGWA AGNSIVVGEY ILNAAGKEVT QWNSRGIGIA VITFAFLINA
INVKAGLFLA NSLGVFKVFI VLFITVTGWV ALGGGIKTNN FHPTGNFHNA FSGETPTAFG
IVNALYNVIW SYVGYSNANY ALGEIKNPVK VLRVAAPTAF IFLGIIYMFV NIAYFAVVPK
EEIAGSGRIL AASFFKFAFG DSAEKAASVF VALSAWANVM SVIFSQGRIV QQLGREGALP
FSRFFATSRP FSTPFVGLME HWIVCIITIV APPPGDAYNF VLNLISYPLN VVNTVLAGGL
LYVYYQRYRG LTEWNPPIKA TLPVVAFFFL ASLYLIVAPY IPPVKGQTVY NSLPYWIHAV
VTWGVFGIGL VYWIVWAKIL PKIGNYTLVS KEIIGEDGFW RNKIYKIAND GSNREEIEND
GNDSSDTKGI N