Gene PICST_68965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_68965 
SymbolFET5 
ID4850841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp200668 
End bp201687 
Gene Length1020 bp 
Protein Length274 aa 
Translation table 
GC content42% 
IMG OID640392549 
Productputative transcription factor Fet5 
Protein accessionXP_001387691 
Protein GI126273660 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.322101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.380866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTCCAGAGCT TCAAGACACC CCATAAACCA CACAGAATGT CCAGAGTAGG CGTATTAGCA 
TTGGGACCTG CTGGAGTGGG CAAGTCGACT TTCTGTAACT CGATAATAGC ACACATGCAG
TCCATCGGCC GTAGAGCTCA CATAGTGAAT CTTGATCCAG CAGCGGAAGC CACTGAATTC
GAGTTCACAA TCGATATCCG AGATTTGATT TCGTTGCAAG ACGTAATGGA AGAAATGGAT
TTAGGTCCCA ATGGAGGCTT GGTGTATTGT TTTGAATTTT TGTTGAACAA CTTGGACTGG
CTCGATGAGG AAATAGGAGA TTACAACGAT GAGTATCTCA TCTTTGACTG TCCAGGTCAG
ATAGAACTTT ACACGCATAT CCCTGTATTG CCTACTATCG TCAAACACTT GCAGACGTCC
CTTAATTTCA ACCTCTGTGC TACATATTTA TTGGAGGCTC CTTTCATCAT AGACACCTCT
AAGTTCTTCT CGGGAGCATT GAGTGCCATG TCAGCCATGA TCTTGCTAGA GTTGCCACAT
ATCAACATCT TGTCCAAGAT CGACTTGGTC AAGGACGAGT TCAGCAGAAA GCAGTTGAAG
AAGTTCTTGA ACCCAGACCC TCTTCTTCTT AGTAATGAAG ATGAGGAGTA TAATCCGAAG
TTTTCCAAGT TGAACAAGCT TATTGCTAAC TTGGTCGATG ACTTTGGTAT GGTTCAGTTC
TTGCCCTTGG ACTGTTCGAA AGATAGCGAC TCTGTAGCCA CGATTTTGAG CTATATTGAT
GACGTTACCC AATGGAGTGA AAGTCAGGAA CCAAAGGAAC CCGTGGACGA AGAGTTTGAC
GTGGATGCTG AATATGAATA AGCGTAACAT AACTAAATTC CAGTGGATAT AAGACAACAG
GCGGTTTAGG GAGCATTCAA GATCATCTAA AGCAAGACAT ATTATTGAGA GTGATCTCGT
GTACCATACA TTCTGTATAT ATAGCAAGCA TTAAGTAAAT TAATATAGAA TTTTCATTCT
 
Protein sequence
MSRVGVLALG PAGVGKSTFC NSIIAHMQSI GRRAHIVNLD PAAEATEFEF TIDIRDLISL 
QDVMEEMDLG PNGGLVYCFE FLLNNLDWLD EEIGDYNDEY LIFDCPGQIE LYTHIPVLPT
IVKHLQTSLN FNLCATYLLE APFIIDTSKF FSGALSAMSA MILLELPHIN ILSKIDLVKD
EFSRKQLKKF LNPDPLLLSN EDEEYNPKFS KLNKLIANLV DDFGMVQFLP LDCSKDSDSV
ATILSYIDDV TQWSESQEPK EPVDEEFDVD AEYE