Gene PICST_66842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_66842 
SymbolMCH2.3 
ID4837422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp548568 
End bp550196 
Gene Length1629 bp 
Protein Length523 aa 
Translation table12 
GC content42% 
IMG OID640388737 
ProductMonocarboxylate transporter 
Protein accessionXP_001382864 
Protein GI150864150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.756809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG CGAAGTTCAT GAAAGAGACA CTTTCGGTTA ATAACTTAAT AAACTCCCTG 
CAACTGTCAA TCGAAACAGG TACGAATCCA GCTGCTGATT GTTTAAAGAT AAATGTGTTG
GATACGATTC CGCAAGCTTC ATGCCACAAG ACAGATCATC TAAATAGAGT CATTGAGAAG
GACGGAGAAC ATTTCAAAGA AAAGAAGAAA GAACAAACAA GTGTGGATCC CGATGTAAAC
GGTGGGTATG CTTACGTAGT TCTCTTGTCT GCTGTATTGC TCAACTTCTG CTCTTGGGGT
AACAACTCGG GGTTTGGTAT CTATTTTGCC TACTACTCTA CAAACGATGT GTTTCCCAAT
GCAGATAAGA TGGACTTCGC TGCTATTGGT GGACTCTGTT TTGGATCGGC GATATTGTTT
GGTCCCGTAA TCAACTATAT CAATGGTTTG ATAGGTATCA AGAAGACACT TATGGTTGGT
AATATCGTCC AGTTCGTTTC CTTGCTTCTC AGCAGTTTCG ATTCTACCCA TAGATTATGG
CAGTTGTATT TGACACAGGC TATGATGCAG TCCGTTGGGG CAGCGTTCAT TGGCTTGCCT
ACTTTCACGG TGTTACCACT TTGGTTCACT AACAAACCAA TTCAAGGAAA ATACAGAATA
AAAGACAGAA TGCTTACTCT TTCGCAAGGA GTAGCAACAG CAGGAACTGG TTTCGGAGGA
TTAGTTTTCA ACTTGGCCAT GCAGAAAGTT CTTGGAAAGT ATGGGTTCAG ATGGGCTTTG
AGAGTTGAAG GGTTTATTTC CTTGGTTGCT TGTACTTTAG CTATCTTGAT GTTAAAGGAC
AAGAAAATGG CTAAAAAGGT CGAATTCACA ATCTTTGACA GGAGCGTCTT CTTTCTGCCA
GGATTCCCAT TCTATGTTGG TTTCATCTTC TTCGGGTTGC TTGGATACGT TGTCACCTTG
TACAGTCTTG CCAACTGGGT CATAGCTTTG GGCTACACTC CTCAACAGGG CTCAATAGTT
TCAGCGATGA CTTCTGTAGG CATTATCGTT GGAAGACCCA TAATAGGATT GATTTGTGAC
AGATTTGGAG CTGTTACGGT CTCGATCGTA GTATATTTTG TTATGGCAAC TTTCGCTCTT
GCCATGTGGA TTCCCTCCAG AAGCTACGCT GAAGCGCTAG TTTTCGCATT CATTAATGGC
GTTTTGTCTG GAACCTTTTT TGTGACAGTT CCAACGATAA CCATGCAGAC TATCGGGCTT
AGGTTCAACA AGCTCAATGT TACGTTTTCC ATGGGATTCA TAGCAGTAGG TGTTTCTGGA
ATCTTGTCGC CAATTATTGG GATTGCCCTA AGGAAGCTGG TCATGTCACC TACTCAGTTT
GAGTACTGTT CCATTTTCGT GGGTGGTTCG TACATAGTCA CCGCTGTGAT TTTGGCATTG
ATGAGAGGGT ATTTGATTTC GGTCCGGGAA CTCGCCGAAC CAGGAATGTC AGACAAGGAG
TTCTTTGGAA TTCGTCCCAA GTTTGTCCGA TACTTGAGAA ATGCTTTCAG AATCCAATCA
GAACCAGTAT AGCTTGTAAC TTTTTATTTG TATGTATCAA TATCACGAGA ATAACAACTA
CTTCCTGTT
 
Protein sequence
MSEAKFMKET LSVNNLINSS QSSIETGTNP AADCLKINVL DTIPQASCHK TDHLNRVIEK 
DGEHFKEKKK EQTSVDPDVN GGYAYVVLLS AVLLNFCSWG NNSGFGIYFA YYSTNDVFPN
ADKMDFAAIG GLCFGSAILF GPVINYINGL IGIKKTLMVG NIVQFVSLLL SSFDSTHRLW
QLYLTQAMMQ SVGAAFIGLP TFTVLPLWFT NKPIQGKYRI KDRMLTLSQG VATAGTGFGG
LVFNLAMQKV LGKYGFRWAL RVEGFISLVA CTLAILMLKD KKMAKKVEFT IFDRSVFFSP
GFPFYVGFIF FGLLGYVVTL YSLANWVIAL GYTPQQGSIV SAMTSVGIIV GRPIIGLICD
RFGAVTVSIV VYFVMATFAL AMWIPSRSYA EALVFAFING VLSGTFFVTV PTITMQTIGL
RFNKLNVTFS MGFIAVGVSG ILSPIIGIAL RKSVMSPTQF EYCSIFVGGS YIVTAVILAL
MRGYLISVRE LAEPGMSDKE FFGIRPKFVR YLRNAFRIQS EPV