| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66106 |
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| Symbol | SKN7 |
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| ID | 4840546 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 902241 |
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| End bp | 904543 |
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| Gene Length | 2303 bp |
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| Protein Length | 421 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391861 |
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| Product | Protein with similarity to DNA-binding region of heat shock transcription factors |
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| Protein accession | XP_001386184 |
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| Protein GI | 150866545 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG5169] Heat shock transcription factor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.415841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTCTCAGTTC TTGTTGGTTG ATCGGATTCA GAATTATACG CCTCGACGCA ACTCTCTATA
GTTATAATTC AATTCAAGAA GACCCCATAT CCAGACAGTA CCCACTGAAT ATCCTGCTGT
CTTGGAAAGG TCGTGATACT AGTTCTTATC ATTGTCTATC TCGTTGTTGT CATTAGTATA
GTATCGAGGA GTACGTAGGG ATTCGACAGG ATTTGGAATA TGAACATCTG GAACTGAATA
CCTGAATATC CGAATCTGAA ATATTTCAAT ATCTGATAAA ATCTGTGAAA TTTATCTTAC
AACAAATACA AGACTACCAT CAATTCCCAT CCTTATCAAT ATCATATCAC TGTCTCCATC
GCTATCGCTA TCACTACCAC TATCATTATC ATTATATTAG AATCCTTCGA ATAATTGATA
GATTTGACCC TTTTCTCGGC GCCCATTTGA AACATAAACT ATGTCGCATC CCATCAAGTC
CGAGCCGAGT CTCTCAGCAT CTGTATCCTC GACTGCGAGC TCCAATCAGT CAGGCTCCAA
CGACTTTGTC AAAAAGCTCT TTCTAATGCT TCAGGAAGAT TCCTACAAGG ATGTCGTGAG
ATGGACAGCT AATGGTGACA GTTTTGTAGT GCTCAACACC AACGAGTTCA CCAAGGAGAT
CTTGCCGCGT CACTTCAAGC ACTCTAACTT TGCCAGCTTT GTTCGTCAGC TCAACAAGTA
CGACTTTCAC AAAGTAAAAG TATCTAATGA AGAGAAAATG GTGTACCCAT ACGGTGAAGA
TGCGTGGGAA TTCAAACACC CTGATTTCAA GATCAACGAT AGGGGCTCAC TTGAAAATAT
CAAAAGAAAG GGCCCTTCTT CTAAAAAAAT CCTGAGTGCC AACACCATCA CTAACGGCGG
TGATTTCACG TCGTCGTCCT CAGTAGCATG TAACCATAAC TTGTCTCAAA TCACGACTGC
TCAGTCCCAT CTCAAGGACC AAGTAGAACA GCTCAGAGCG GAAAACAAAC AATTGCATCA
GGATGTCAAC GTTCTCCAGA CGAAGTATAA GACGCTTATC GAGAACATTG TAGCCATAAA
TACTTTTGAT GAGCGCTACC ATCGCTCCAT GGGCATTTTG ATTAACTGTT TGCTCCAAGC
GGGAATCAAA CTCCCTCCAT TAGATTTTCC CAATCCCGCA CTCATGAGTC TCCAGCAGCC
GTCAAGACAT CCTCAACAGC AACAACCCCA ATCCTCGTCT CAAATTCAAT CTCAACAACC
ACAATTACCA CCATCATTAG CACCTTCCCT CATACCGCCA ACTCAAGGTC CTGTAGTCAA
CCCACCGTTG GTAACCAACG TACCTCCACA GCTGGGACAT ATTGCACAGC TTTCACCCAC
AATAGCTAGT CCCAACGGCG TGAGAATACC GTTACAGCCA GGCTCTGCAG CTTCTCAAAG
TGTAGCACCA GGCGTAGCAG TAGTACCACC GCCAGGTCCC AATGAGCCGG GAGGGCCCGG
AGGTGCAGCT TTTATGACGG GACAAGGACC TCCTCCTGTA GTTGCTAGAC AGGCTTCGCC
GAGCGATACA TTAACTCCCA AACAGCAAGG AAACTCGTCT TCTGGCTCAC CCAGGACAAC
TGGTCTTGTA GCACAGACCA CCACGACAAA CATACCCAAC CCCAAGTTCC ATGTACTCTT
AGTGGAGGAC GACAATGTGT GTATCCAGTT GTGTCGTAAG TTTCTTGTCA AGTATGGCTG
TCAAGTTACC GTAGTTACCG ATGGACTCAA TGCAATCTCC ACTGTAGAAC ACACCAAGTA
CGACTTGGTT TTGATGGATA TCGTAATGCC CAACTTAGAC GGAGCCACGG CGACCAGTGT
AATCAGATCG TTCGATACAA AGACCCCCAT CATCGCCATG ACAGGAAACA TCGAAGATAA
CGACTTGGTG ACATACTTGC AAAACGGGAT GTCGGACATT TTGGCCAAAC CATTCACCAA
AGATGATCTC TACTCCATCT TATCCAAGCA CTTGTTGACA GACGAGTCGA AGACTGCTGC
TGCTGTTGGA GTAACTTCCA GAAACATCAG CATCAGCGGA CCTACCTTGC CAGCAGAATC
CGACGAAGAC CCACTTCTCA AGAAACAGCG ACTTCAATAA TATCAATGAA AATAATAAAC
ATGAACAATG ATAAAAGGTG AATGTAATAT AGATTTGGCT GCTGTACTAT TATCATAATA
ATTATATACT ATATCTTGCA AAAACGTGCT GGTAAAATAA CAGTGCTTTA ATTATATAGC
TGTAATATAC ACTGTACTTC TAT
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| Protein sequence | MSHPIKSEPS LSASVSSTAS SNQSGSNDFV KKLFLMLQED SYKDVVRWTA NGDSFVVLNT
NEFTKEILPR HFKHSNFASF VRQLNKYDFH KVKVSNEEKM VYPYGEDAWE FKHPDFKIND
RGSLENIKRK GPSSKKISSA NTITNGGDFT SSSSVACNHN LSQITTAQSH LKDQVEQLRA
ENKQLHQDVN VLQTKYKTLI ENIVAINTFD ERYHRSMGIL INCLLQAGIK LPPLDFPNPA
LMSLQQPTTG LVAQTTTTNI PNPKFHVLLV EDDNVCIQLC RKFLVKYGCQ VTVVTDGLNA
ISTVEHTKYD LVLMDIVMPN LDGATATSVI RSFDTKTPII AMTGNIEDND LVTYLQNGMS
DILAKPFTKD DLYSILSKHL LTDESKTAAA VGVTSRNISI SGPTLPAESD EDPLLKKQRL
Q
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