| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63922 |
|---|
| Symbol | |
|---|
| ID | 4840944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | - |
|---|
| Start bp | 497484 |
|---|
| End bp | 498185 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640392259 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386686 |
|---|
| Protein GI | 126140328 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.462622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.14589 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ACTATAGAGG TTGAATACGC TTCTGAAGCC GTCAAAAGAG GTACCTGTGC TGTAGGTGTC
AAAGGCAAGG AGTCTGTAGT CTTGGGCTGC GAAAAGAGAA CCACATTGAA GTTGCAAGAT
CCTCGTATCA CTCCTTCTAA GATCTGTAAG ATCGACAACC ACGCATTGTT AGCATTTGCC
GGATTGAATG CCGATGCCCG TATCTTGGTG GATAAGGCTA GAGTCGAGGC ACAGTCACAT
AGATTAACCC TAGAAGACGC TGTTTCCATA GAATATTTGA CCAAGTACGT TGCTGGGGTG
CAGCAGAAAT ATACTCAGTC GGGAGGTGTA AGACCGTTTG GGATTGCCAC CATCATTGCT
GGATTCGACA GTAACGACAC TGTGCCCAAG TTATATCAAA CAGAACCTTC GGGAGTGTAC
AATGCCTGGA AGGCTCATGC CATTGGTAGA TCTTCCAAGA CTGTTAGAGA ATTTTTGGAG
AAACATTATG AAGAAGACTT GTCTGACGAA CAGACCGTTA AGTTGACTAT CAAGTCGTTG
TTGGAAGTTG TTCAGACCGG AGCCAAGAAT ATCGAGGTGT CGGTGTTGAA GACAGGTAAT
GTGATCAAGA CCTTGACTGT AGACGAAATA AAGACGTATG TCGACGAAAT CGAAGCTGAA
AAGGCTGCTG AAGCCGAAAA GAAGAAGAAG CCCAGAGATT AG
|
|---|
| Protein sequence | TIEVEYASEA VKRGTCAVGV KGKESVVLGC EKRTTLKLQD PRITPSKICK IDNHALLAFA
GLNADARILV DKARVEAQSH RLTLEDAVSI EYLTKYVAGV QQKYTQSGGV RPFGIATIIA
GFDSNDTVPK LYQTEPSGVY NAWKAHAIGR SSKTVREFLE KHYEEDLSDE QTVKLTIKSL
LEVVQTGAKN IEVSVLKTGN VIKTLTVDEI KTYVDEIEAE KAAEAEKKKK PRD
|
|---|
| |