Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60390 |
Symbol | LIP11 |
ID | 4839691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 177289 |
End bp | 178230 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640391006 |
Product | triacylglycerol lipase |
Protein accession | XP_001385052 |
Protein GI | 150865719 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCAATTGACC GAGACATATA TTCAAATCTT TTTACTTACG CTCACCTCAT AGATATCTCA TATTGTATAT CTAGCGTTGG AGGAATAAGT GAACCATTTC AATGTGATTT GAGCTGTGAA GAACGGTTTC CTAATGTGAC TTTGGCGTAC CAATGGTATT TCGATGATCT GGTAACAGGA TACATAGCCA CTACCTATGC CAACATCTTT AATTATAACG ATACAAGCAC TGAAAAACCA CCGAAGAAGA CAATTATAGT CTCACTCAGA GGTACACGAT CGTTTTTCGA CTCTTACACT GATTTGAAAG TCGACATGGT ACAATATTCC AACCTTAGAC ACAAACTCCC GTATTGCGGA GACAATTGCA AAGTTCACAA AGGATTCTTT GAATACTACA TCCACACTCT TCTTAATATC AGAGTAGTTT TAGACAAGGA ATTAAACTAT GAAAACTGCG AGTTGCTCAT TGTGGGCCAT TCAATGGGAG GAAGTGTAGC TCTTTTACTC GCGCTACATT ATCTAGATCT AGGGTATGTC CAAATGACTT TGGTGACAAT GGGACAACCT TTAGTAGGAA ACAGAGAGTT TGTCAAGTGG GTTGACAAGG TAATGGGTAG TAATATTGAA CCCAAACACA ACACCTACAA TAGAAAGTAC TTCCGAATAG TACATAAGAA TGATATTGTG ACCACTATCC CGAATAACAA CATTTTGAAC GCCTATCACC AGTTTGACAA CCAGATCTAC TTGAACTGCT CGTCAGACAC AACAGTACCA TTCCCAGATA CAGTGGTGGA TTGTGTAACG GGAGACAATC CTTACTGTAT CAGGAAAGAC TTCCAGGGCA TCAGCCTAAT AGACTACATT AGTCGCAACT ATTTTAAAAG TCACAACACG TACTTTCGTA AGCTAGGGCT TTGCGGAATG AAAATCAAAT AG
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Protein sequence | PIDRDIYSNL FTYAHLIDIS YCISSVGGIS EPFQCDLSCE ERFPNVTLAY QWYFDDSVTG YIATTYANIF NYNDTSTEKP PKKTIIVSLR GTRSFFDSYT DLKVDMVQYS NLRHKLPYCG DNCKVHKGFF EYYIHTLLNI RVVLDKELNY ENCELLIVGH SMGGSVALLL ALHYLDLGYV QMTLVTMGQP LVGNREFVKW VDKVMGSNIE PKHNTYNRKY FRIVHKNDIV TTIPNNNILN AYHQFDNQIY LNCSSDTTVP FPDTVVDCVT GDNPYCIRKD FQGISLIDYI SRNYFKSHNT YFRKLGLCGM KIK
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