| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_59792 |
|---|
| Symbol | TRR1 |
|---|
| ID | 4839117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 856827 |
|---|
| End bp | 857786 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640390432 |
|---|
| Product | Thioredoxin reductase |
|---|
| Protein accession | XP_001384831 |
|---|
| Protein GI | 126136615 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCACC ACAGAGTCAC TATTATCGGA TCCGGTCCAG CTGCCCACAC TGCTGCCATC
TACTTGGCCA GAGCCGAAAT CAAGCCTACC ATGTACGAAG GTATGTTAGC TAACGGTATC
GCCGCTGGTG GTCAGTTGAC TACAACCACT GATATCGAAA ACTTCCCAGG TTTCCCTAAT
GGAATCAACG GTACCACTTT GATGGAACAA ATGAAGGAAC AATCTGAAAG ATTCGGAACT
GAAATCATCA CCGAAACCAT CTCTAAAGTC GATTTCTCTG CCAGACCCTT CAAGTTGTGG
ACTGAATGGA ACGAAGACTC GGAACCAGTC ACTACTGACG CTGTCATTAT CGCTACCGGC
GCTTCTGCTA AGAGAATGCA CATCCCTGGT GAAGAAACCT ACTGGCAACA GGGTATCTCT
GCTTGTGCAG TTTGTGACGG TGCCGTTCCT ATCTTCAGAA ACAAGCCTTT GGCTGTCATT
GGTGGAGGAG ACTCTGCATG TGAAGAAGCC TTGTTCTTAA CAAAGTACGC CTCCAAGGTA
TATCTCTTGG TCAGAAGAGA TGTTTTGAGA GCCTCTACCA TCATGCAAAG AAGAGTGGAA
AACAACGAAA AGTTGGAAAT CTTATGGAAC ACCGAAGCCA AGGAAGCTAA GGGTGACGGA
AAGTTGTTGC AATCGCTCAG CATCTTCAAC AACAAGACCA ACGTCACCTC CGATTTACCA
GTCAACGGTT TGTTCTACGC TATCGGCCAT ACCCCAGCTA CACAAGTGTT TGCCAACCAA
CTTAAAACCG ACAGTGAAGG CTACATTGTT ACCACTCCAG GTACAGCTGA AACTTCTATT
GAGGGTGTTT ATGCTGCTGG TGATGTCCAG GACAAGAAAT ACAGACAGGC TATCACTTCT
GCCGGTACCG GCTGTATGGC TGCTTTGGAC TGTGAGAAGT TCTTGAGCGA ACAAGAGTAG
|
|---|
| Protein sequence | MVHHRVTIIG SGPAAHTAAI YLARAEIKPT MYEGMLANGI AAGGQLTTTT DIENFPGFPN
GINGTTLMEQ MKEQSERFGT EIITETISKV DFSARPFKLW TEWNEDSEPV TTDAVIIATG
ASAKRMHIPG EETYWQQGIS ACAVCDGAVP IFRNKPLAVI GGGDSACEEA LFLTKYASKV
YLLVRRDVLR ASTIMQRRVE NNEKLEILWN TEAKEAKGDG KLLQSLSIFN NKTNVTSDLP
VNGLFYAIGH TPATQVFANQ LKTDSEGYIV TTPGTAETSI EGVYAAGDVQ DKKYRQAITS
AGTGCMAALD CEKFLSEQE
|
|---|
| |