| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57298 |
|---|
| Symbol | |
|---|
| ID | 4838108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 1137359 |
|---|
| End bp | 1138885 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640389423 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383502 |
|---|
| Protein GI | 150864609 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTACAAGATG GCCCTAGTAG CCAATCTCTG GAGCCAGAGG TAGCCAGCAT TTCCTTGAGG
GAAGACCTTC TTTTCAATAG CAATAGGGAT GTCAACAGAG TAGCACACTC TCAGATTGGC
AGACAAGTAG GCAAGATTCC TTCAAAGAAA TCCCCTGATG GTGATTCTTA CCAAGAATGG
ATAGCTGACG CTCTTGGGTT CTCAAACGAG CTGAAGGTTC TACAATTCGA ACACAACAGA
TCCCCCAAGG ACAAAAGCAG AATGCAGAGA GGGGGAAGAA GTCAAGGGTC CAGAAGCAAT
AGCCATGGCT CCATCGAGAT TGCGGGTCCA CTTCTATCTA CCTCTACTTC TAAGGAAGTT
ATACAATTAT TGGCTTCCAG TAAACTTGAA CAGGAAGCTC CCAGAACCAG ACCTGCCACA
ATATTGACGG CAAAGGATAT TCTCCAAGCT CCAGGATTGA GAAACGACTT CTACTTGAAT
TTGGTGAGTT GGTCAAAGAT GACTAACAAA GTTTTGGTCG GACTTGGAAG CCACTCATAT
TTATGGGGAG TGGACAATAA AGTGGAAGAA GTCAATTGTA TTTCTAAAGA AACCATCACA
GCAGTATCTT GTTCTGATTC CGAGTTGGCA ATTATAGCTA CGTATGGGGG CCATATATAT
TTGGTTGATA TCGAACATAA CACTCTTCGT TCGACATACT ACAATAATGG GAAATGTATG
TTTTGTTTTG CTTGGGTGCC AAACTCCCAG ATGTTTCTAG CAGGGGATGA AGATGGAGAA
GTATATTCTT TTGAAATAGA CAAGAACATG TTCTACGCAT TGAGTTTGAA GAACAAAGTC
AAATGCAATC TGCAACAGAT ATGTGGTAAT TATAAACCTA TACCCATTAC AATCTAGTAC
AGGGAAAATA CTGACAATAC ACTAGGAATG GCCATAAATT GCCAAGGAAC GGAGGTTGCT
ATAGGTGGAA ACGATAATCG TTGCTCGTTG TGGCAGCTTC TTCCCACTGC AGAAGTACAT
TTACGATTCA TTCTTCCACA CAATGCTGCT ATCAAGGCAA TAGCCTTTTG CCCGTGGACA
AGTTCTCTAT TGGCTACTGG GGGAGGGAGT AAAGACAGAA AGATTCGCTT CTGGCATACA
AATAGTGGAA CGTTGCTCAA GGAGTTCAGC ACTAGTGGCC AGATCACTTC ACTAGTATGG
TCAAGTTTCC GCAAAGAAAT CACTGCTACG TTTGGGTTTG GCAGCGAGAA GAAGTCGTAC
CTAATGCAAG TCTACTCATA TCCCCTGATG GCTACGCTTG TTGAAGTTCC AGCTACTCTT
AACTTGAGAA TCCTTTCTTC CACACTCAGT CCAGACGGGA CCTGTTTGTG TGTTGCAACC
AATGATTCTA CGATTCGTAT TTACAAGCTC TGGGAGAAAA CACACAAGTT GGTGAAGTCG
CCCGATTCGC TGGGGTATGG AAGCTACGGG AGCTCACTTA TAGATCTACA AGAAGGGGTG
GTCAAGCGTG GTGAGACCAT CAGATGA
|
|---|
| Protein sequence | LQDGPSSQSS EPEVASISLR EDLLFNSNRD VNRKSPDGDS YQEWIADALG FSNESKIPQG
QKQNAERGKN HGSIEIAGPL LSTSTSKEVI QLLASSKLEQ EAPRTRPATI LTAKDILQAP
GLRNDFYLNL VSWSKMTNKV LVGLGSHSYL WGVDNKVEEV NCISKETITA VSCSDSELAI
IATYGGHIYL VDIEHNTLRS TYYNNGKCMF CFAWVPNSQM FLAGDEDGEV YSFEIDKNMF
YALSLKNKVK CNSQQICGMA INCQGTEVAI GGNDNRCSLW QLLPTAEVHL RFILPHNAAI
KAIAFCPWTS SLLATGGGSK DRKIRFWHTN SGTLLKEFST SGQITSLVWS SFRKEITATF
GFGSEKKSYL MQVYSYPSMA TLVEVPATLN LRILSSTLSP DGTCLCVATN DSTIRIYKLW
EKTHKLVKSP DSSGYGSYGS SLIDLQEGVV KRGETIR
|
|---|
| |