Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57180 |
Symbol | MTR3 |
ID | 4838218 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 142502 |
End bp | 143386 |
Gene Length | 885 bp |
Protein Length | 289 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389533 |
Product | exosome exoribonuclease |
Protein accession | XP_001383313 |
Protein GI | 150864479 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.659196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATA GAAGAAGACT TTTAGGTTCG GTAAATACAA TTATACCGAA TGTGGGTCTT TCATCAGCAG ATGGAACTGC ACAGCCTGCG AAGATTGAGT CTAAGACAGA GCCTAGAATC GATGGCTTAA GACCATTCTT TTTGAAGACA GGAATCATTG AAAATGCCAA TGGATCGTCA TATCTAGAAG TGGGCAATAA CATAATCGAA GTGCTGGTAT ATGGTCCACG TCCAATCAGA GGCTCTTTCA TCGATAGAGC CTCTTTCTCT GTAGAGTGTA AATTTTTGCC ATTCATCTCC CAGCCCAACG AGCATTTGTA CAACAATACC AGCATTAGTG CCAGCTCTGC TGCAAACACC ACCAACCAGA CCAACGTCAA CGTCAACGGC CGTACCGGCT TGACCAGCAT TGAACACAAG ATCTCGTCGT ATATTGAGAC GTCTTTGTTG CCTTCTATAG TGTTAGAAAA GTATCCCAAG TCCACCATTG ACGTCTTTGT CACTATAATT TCAACAGACT CTTCACTAGG AGGGTCATAT CTGGACACAA AGATGCTCAG TCTTGTCAAC TGGGTGTTGA ACGCTTCTTC GGTGGCTTTG GTCGACTCGG GAATCGAAGT AAAGGACGTT GTAACAAGTG GAGTAGCTCA TTTGCAGAAC GATGTTCTCG TTCTTGACCC TACTGAAATT CAAGAGAAGG ACGAAGGGTC TGTTTCCTGT GTAGCCAGTT TCATGAACTT ACGAAACGAC GAAATAGTAG GGATTTGGAT AGAAGGTGAC CAGACAAACT TGGAGAATTC GCAGGTGGAC CATTTACTCG ATGGCTGTAA CGATATGTCC AAGAAGGTAA GAGCCAATAT CAATTCCTAT TTCACCACTT CTTAA
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Protein sequence | MSDRRRLLGS VNTIIPNVDG TAQPAKIESK TEPRIDGLRP FFLKTGIIEN ANGSSYLEVG NNIIEVSVYG PRPIRGSFID RASFSVECKF LPFISQPNEH LYNNTSISAS SAANTTNQTN VNVNGRTGLT SIEHKISSYI ETSLLPSIVL EKYPKSTIDV FVTIISTDSS LGGSYSDTKM LSLVNWVLNA SSVALVDSGI EVKDVVTSGV AHLQNDVLVL DPTEIQEKDE GSVSCVASFM NLRNDEIVGI WIEGDQTNLE NSQVDHLLDG CNDMSKKVRA NINSYFTTS
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