| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57110 |
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| Symbol | FUN30 |
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| ID | 4837990 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1645541 |
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| End bp | 1648939 |
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| Gene Length | 3399 bp |
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| Protein Length | 1093 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389305 |
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| Product | helicase of the Snf2/Rad54 family |
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| Protein accession | XP_001383600 |
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| Protein GI | 150864667 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.795427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGT ACAAGAAAGA TCGGCCTGGA ATCAGGCCCG AGACCGAGAA AACTCCCAAA
AAGGAAAATT ATGTCCAAGT TCCACTGTCT TCGCCGATTC AGATCAAGTC GTCACCACAA
CAGCCTTCAC TTCTACCACC ATCTCTTAAT AGCAAATATC TGTTAAGCGA AAAAGAACGC
CAGCTAGAAA CTAAGAGACA GGCTATCAGA CAGCACAAAG ATTTTTCTGT CGTTCGCAAA
CGTTTCTACT ATCTCAAAGA GAGTGATATT TTCAAAGGCT TTGTCAAGGG CAAGGGAAAT
CTCCGTGAAA TCACCCAATG GCTTACTGAC AATTACAACA AAGCCGAAAT CCTAGGAAAG
GAAGAAGAGG AACGTAGACG GCAGCGCGAT GAAGCGGAAA GAGTGAAACA GAAACAGTTA
GAAGACCGTA TGAAGCATGA ATATGAGAAA CGCGAAGAGC GTATTAGACT CCAGCAACAA
ATGAAAACCG ACACCGATAG CCGCGTAGTT GATTTACAAG ACGGCACACA CAAAAACAGC
TTCAGAGATT CAAATGGAAA TGTTCGTAGT GTCAAAGTTG GAATCTCAGA TGATGATGAC
GACGTCGAAG AAGTTGATGA TGTAGACGAC GAAGACGAAG ACGATGACGA AGATTCTTTG
CCCATAAAAA TGCGTGGAAG AGTCGGAATA AAGCGGGAGG ACCGATCTCC TACAAAGGAT
GCGATTCGTC ACACATTCAG CTCCCAGGAA CACAGCACCA AAGTTGTCAG CAGTAAACCC
AGGGTTTCCA TCTTGGATAA ATACAAGTTC AAGTCCAAGA GCCAGCCTAC ACTCGACCAC
TTCAGAGGAG CCCTGGATCT CCAGCCCAAG AGACGTAAAC TTGTCAGAGC CTCAGCTTTG
GAAGACGATT CTGCCTCTTC TTCAGCCACA GGCTCACCAA TGTCTGCTCC AAACTCGCTA
GCTGCGTCGT TTGCCTATCA GTCAGACAGC GTACCCAAAA TGAAAAAGAC AATACTAGCA
GACAATGACG ATGATTTGAG CGATATGATT GTAGCAGACG ATGACTTGGA GCGTTTAGAA
GAAAAGATCA AACAGAACAT CAAAGCCAAG CGAGCTCAGA AGAACGAAAT CGTCACTGTC
AGTGACGACG AACTTGAAGA AGATGATATC AGTGACGACA TGTCAGAAGA AGACGACGAA
AACAACTACC AAACTGGTAT TACTTCTATT GATAACCAGA TCTTGGAGTT CTTGAATGAT
GCACCTGTGG ACGATTTGAT TGAAATCTGT ACTCTCGAGC CGGAAGTTGC AAAGTTCGTC
ATCCTGCAAA GACCATTCAA CACGATATAC GATGTTTCTG AAAATAATTT TGAACCAGAA
GACGAAGCTA AGGCTAAGAA CAGCAGCAGA AGAAGAAAGA CTCTAGGCTT GAGAATCATA
GAAAGCACCG AGTTTTCCTT AAAGGGCTAC AAGGCTGTAG ATTCGCTCAT CAAAACCTGT
TCCAAGTACG GTACTTCAAT CTCTAACCAA ATTAATACTT GGGGTGTTAC TACTACCGGA
CAGGGTGAGT TATCTGTTAC TGATATAGAC CCTGCTGATG ATGAGGTGAA GGAAATTATA
GATTTAGACG AAGAGAACGA TGACGACGAA GAAGAGGTAG TTGTGACCCA TTACAAGAAG
AAGGGATTGA GATACATCAA GCACAAGCCA GCATTGTTGG CCGACGAAAT TACGTTGAAC
AATTACCAAC AAGTGGGCAT CAATTGGCTC AATTTATTAT ACCAAAACAG GTTGTCTTGT
ATATTGGCAG ATGAGATGGG TTTGGGTAAA ACATGCCAGG TTATTGCCTT TATGGCTCAT
TTAAAGCAGA CCGAAGAAAA GAAGGGTCCT CATTTGGTTG TCGTTCCAGC TTCTACGCTT
GAGAACTGGT TAAGAGAATT CAATAAGTTC TGTCCCGACT TGAAGGTACA AGCTTACTAT
GGTACAGTCA AGGAACGTGA AGATTTAAGA TACGAACTTA GAGAAATCGA CTTTGACGTC
TTGGTGACTA CATATACGTT AGCAGCCGGT TCTCCGTTGG ATTTCAAATT CTTGAGGAGT
CAGAATTTCA ACATCATTGT ATACGATGAA GGTCACTTCT TGAAGAATTC AGGAACTGAA
AGGTACAACA GATTGATGAA ATTGCAAGCC AAGTTCAGAT TGTTATTGAC TGGTACACCC
TTGCAGAATA ACTTGAAGGA GTTGGTCTCC TTGTTGTCTT TCATGTTGCC AAAATTGTTC
AACGAAAAGA AAGAAGACTT ACAAGGTTTG TTCAACCAGA AGATGGGTAA AGTTACTTCG
TCATCAAAGT CAGACAACTA CAATCCCTTA CTCTCGATTC AAGCCATCAG AAAGGCAAAG
ACAATGATGA CTCCGTTTGT CTTAAGACGT AGAAAGGACC AGGTTCTTCA ACACTTGCCA
GCCAAGTGCC ATGAGATAGT GAAGTGTGAC TTGTCCAAGG ACCAAAGAAG TATTTACGAT
GAACTTTACA ATAAAGCTAA GTCCACCAGA TCAGAAAGGG AGAGAAGAAA ACTTCTTAGT
TCCAAGGAGC AGGTAGAATT AAACAAGAAG CAACCGATTG AGTCTTCTTC CAACGTATTG
ATGGCATTAA GAAAGGCTTC TTTGCATCCT CTTTTGTTCA GAATCCAGTA TACTGACGAG
AAACTAGCCA AAATGGCCAA GGCTATCATG AATGAGCCAG AATACGTGGA AGCCAATCAA
ACATATATCT TCGAGGATAT GCAAGTCATG TCAGACTATG AACTCAACAA TCTTTGTGCT
AAATTCCCTA AGACTATGTC CCCCTATAAA TTGAACGAAG ACGCCTTTCT CAATAGTGGA
AAAGTATTGG AATTGCAAAA GACATTGAAG CTAATCATCG AGGGCCGGCA AGAAAAGGTC
TTAATTTTCT CTTTATTCAC CCAGGTGTTG GACATATTGG AAAGAGTCTT GACTCAGTTC
AAATACAAGT TCGTTAGATT GGACGGAGCC ACTTCTGTCG AATCAAGACA GGATATTATT
GACGAATTCT ATGACGATGA AACAATTCCA ATTTTCCTTT TATCTACCAA GGCCGGTGGA
TTTGGGATTA ACTTGATCGC CGCCAACAAT GTCATTATTT TCGATCAGTC ATTCAACCCT
CACGATGACA AGCAAGCCGA GGATCGTTGC CATAGAGTGG GCCAAAAGAA GGAGGTCACA
GTGTACAAGC TCATTGTCAA CGATACAGTC GAGGAAAATA TGTTGAAGTT GGCCGAGAAC
AAGTTGCAGC TTGACCAAAC CATTAGTGCC GAAGGGGCCG AAGAGGCTAA GTTCGAGGAG
AAGGCAGCCT CTTTGTTTGA AAAGTTGCTC TTTGAATAG
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| Protein sequence | MSWYKKDRPG IRPETEKTPK KENYVQVPSS SPIQIKSSPQ QPSLLPPSLN SKYSLSEKER
QLETKRQAIR QHKDFSVVRK RFYYLKESDI FKGFVKGKGN LREITQWLTD NYNKAEILGK
EEEERRRQRD EAERVKQKQL EDRMKHEYEK REELGISDDD DDVEEVDDVD DEDEDDDEDS
LPIKMRGRVG IKREDRSPTK DAIRHTFSSQ EHSTKVVSSK PRVSILDKYK FKSKSQPTLD
HFRGASDLQP KRRKLVRASA LEDDSASSSA TGSPMSAPNS LAASFAYQSD SVPKMKKTIL
ADNDDDLSDM IVADDDLERL EEKIKQNIKA KRAQKNEIVT VSDDELEEDD ISDDMSEEDD
ENNYQTGITS IDNQILEFLN DAPVDDLIEI CTLEPEVAKF VISQRPFNTI YDVSENNFEP
EDEAKAKNSS RRRKTLGLRI IESTEFSLKG YKAVDSLIKT CSKYGTSISN QINTWGVTTT
GQGELSVTDI DPADDEVKEI IDLDEENDDD EEEVVVTHYK KKGLRYIKHK PALLADEITL
NNYQQVGINW LNLLYQNRLS CILADEMGLG KTCQVIAFMA HLKQTEEKKG PHLVVVPAST
LENWLREFNK FCPDLKVQAY YGTVKEREDL RYELREIDFD VLVTTYTLAA GSPLDFKFLR
SQNFNIIVYD EGHFLKNSGT ERYNRLMKLQ AKFRLLLTGT PLQNNLKELV SLLSFMLPKL
FNEKKEDLQG LFNQKMGKVT SSSKSDNYNP LLSIQAIRKA KTMMTPFVLR RRKDQVLQHL
PAKCHEIVKC DLSKDQRSIY DELYNKAKST RSERERRKLL SSKEQVELNK KQPIESSSNV
LMALRKASLH PLLFRIQYTD EKLAKMAKAI MNEPEYVEAN QTYIFEDMQV MSDYELNNLC
AKFPKTMSPY KLNEDAFLNS GKVLELQKTL KLIIEGRQEK VLIFSLFTQV LDILERVLTQ
FKYKFVRLDG ATSVESRQDI IDEFYDDETI PIFLLSTKAG GFGINLIAAN NVIIFDQSFN
PHDDKQAEDR CHRVGQKKEV TVYKLIVNDT VEENMLKLAE NKLQLDQTIS AEGAEEAKFE
EKAASLFEKL LFE
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