Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_56808 |
Symbol | RAD26 |
ID | 4838141 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1669235 |
End bp | 1672702 |
Gene Length | 3468 bp |
Protein Length | 1067 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389456 |
Product | DNA dependent ATPase |
Protein accession | XP_001383607 |
Protein GI | 150864673 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0205871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGT TCAACCGGGA CCTTGAAGCT CTTGGAGCAA AGCTTGTGGA TCAGGACAGT CTTGAGACTT CCATCACAAG AAGAGCCAAT GAAGCCCTTC TTTCCAAAGA CGCGGAGTTG GACCAGAAAC GTTTAGAAAA AGCTACGAAG GATTTGAACT CAACTTTAAA AAGAATCAGT ATTCTTGAAA GCAGACTAAA TAACCCGAGA ACGAAGTTGA GCGAACGGCA GAAGCTCAGG GATGAAATCA AATGGTTTGA ACAGAATGAA TTGGTACCGC GAAGACGCGA TGTAGAAGAT ATCACTGCCA GGCTCGAAGA AAGCAAGAAA CAGTTGGATG GAGCTCAATC TGCTAAAGAA GGCAATACTG TGGAATCGAA GAATGAGAAG CTTCCAGGAG AAACAGAAAA AGAATTCTTG ATCAGAACTG GAAAGATTAC TGCGTTTGGA AATATCAACT CTTTCCAACA GATTGGTCAA GAAACAGAAC AAGTGAAGAG TCATGTATTT TTACGAGCTC CAGGGTTTGA GGATACCCAG ACAATGAAAA TTGAGAAAAG GAAAGAAGAT TTTGATATGG ATAACACAGT AGAACAGGAT AGCATAGATG AAGATGAAGA ATCATACGAT GATAACGGAG CATTACTTGA AGATCAGGAT CGTGACCAAG ATTTTCAGGA TACGCAAGAA GATTTAGGAG AAGATTCTGA TGGTTCTGTG TATGAAGTCG AAAAAGAAGA AGACAGTAAT TCTGATTCGG AGACACCTAT AGTCAAAACG GAAGAAGACG ATTTAATTGA AAATAACAAT TACGATTCAG AAGAACTTAA CGATGCTGAA GAGGAACTGT CCACTACGTA TCTCCGAAAT GTTGATGATG GAGACGAGCT TGTCTACCAA CAGAGACTTA GACAGTGGGT TTCCAGAAGA GCCAGTCTTC GTGGAACTGA GGTTTCGGAT TCAAGCAAGC AAGAGTGGTT CAAACCTCAT CCCACGATTC CTGACGCAGT GCTTAACAAC CAATTCAAAT TACCTGGCGA TATTTACCCG TCCTTATTTG ACTATCAAAA GACGTGTGTT CAATGGCTCT GGGAATTGTA TTCCCAAAAG ACAGGAGGAA TTATTGGTGA TGAAATGGGA TTAGGAAAAA CGATTCAGGT AATTTCTTTC GTAGCAGGTC TTCACTATTC TGGACTACTT GACAAACCGG TACTCGTTGT AGTGCCTGCT ACGGTATTGA ACCAGTGGGT TAACGAGTTT CACAGGTGGT GGCCACCTTT ACGTTGTATC ATATTACATA GCATAGGCTC TGGGATGGGG AAGAGTGCTG TTAGATCTGA AGAAAAACTT GAAGAGTTTT TGGAAAATAG TGATCCTACT CAGTCAAAGA ACTCTTTACG TGGCATCAAC AGTCAGATAA ATGCAAAGGA AATTGTTGAC AGAGTTATGG AAAAGGGACA TGTCTTGGTG ACAACTTATG TCGGCTTGAG GATATACTCC AAACATATTC TTCCACGAGA ATGGGGATAT GTTGTTTTGG ATGAAGGTCA CAAGATTAGA AACCCAGACC TGGATATTTC ATTGACTTGT AAGCAAATTA AGACCTACAA CAGAATAATT TTGTCTGGAA CGCCAATCCA GAATAACTTG ATAGAGTTAT GGTCATTGTT TGATTTTGTC TTTCCCGGAC GTTTGGGGAC TTTACCTGTA TTCCAGCAAC AATTCTCTAT TCCTATAAAT ATGGGAGGGT ATGCCAATGC TTCGAACATA CAAGTACAAA CTGGGTACAA GTGTGCTGTT ATTCTTCGTG ATTTGATTTC GCCGTATTTG TTGAGAAGAC TCAAAAGCGA TGTCGCTCAG GATTTGCCTA AGAAAAATGA GATGGTTTTG TTCGTGAAAC TAACTCAAGT TCAACAGGAG CTCTATGAAA AGTTTTTGCA TAGTGAGGAG TTGAGCTCTA TATTGAAAGG CAGACGAAAT GTCTTGATGG GTGTTGATAT ACTTCGAAAA ATATGTAATC ATCCTGATTT GGTAAATCGT GATATCCTTG AACATAAGAA GAACTATAAC TATGGAAATC CTGTTAAGTC AGGAAAAATG CAAGTTTTGA AGAACTTGTT GCAATTATGG CAGAGTCAGG AGCATAAGAC GTTGTTGTTT TGCCAGACCA GACAGATGCT CGATATCTTA GAGAAGTTTG TAGCTAATCT CAGACTCTTG GATATCGATC GTCCTGGTGA GGAAAAGCCA GATGAATATT TTACCTATTT GCGAATGGAC GGGTCAACTC CAATTGCCAA GAGACAGGAT CTTGTGGATA AATTCAATTC TGATCCTAAC TTACATGTTT TCTTGTTGAC AACTAAGGTA GGTGGACTTG GTGTGAACTT AACTGGGGCT GATAGAGTTA TCATTTACGA TCCTGACTGG AATCCGTCTA CAGACATCCA GGCTAGAGAA AGAGCATGGC GTTTGGGCCA GAAGAAAGAT ATTACGATCT ATCGATTAAT GACTACAGGG TCGATTGAAG AAAAGATATA TCACCGACAG ATATTCAAGA CATTCCTCAC CAACAAGATT TTGAAAGATC CCAAGCAGAG AAGATTCTTC AAAGTCAACG ATTTGCACGA CTTGTTTACT TTGGGAGATC AAAACGAGGT CGGAACAGAA ACAGGAGACA TGTTCAATGG ATCTGAAACA AACTTTGGAG GCAACAAGAC GAGAGCTCCT TCCACTTTGC TCAAGAAAAA GCACAAGAAC GACGACGATT TCTATAAGGT TGCTAGTATA ACTGGAGTTT CAAAGTTGGA CAAGTTTCAG GGTGATGAGG AAGAAGAGGA AGTGAGCGGA GAGTCTCGTG ATGAGAACAG AATCATGGAA GGCATCTTTG CTAATAGTGG TGTACACAGT GCCTTGAAGC ATGATGAGAT TATCAATTCT AGTAACCAAG AAATGTCTCT TGTTGAAAAA GAAGCTAGCA AAGTAGCCAA CGAAGCAGCT CTGGCATTGA AGAGATCCAG AAAACTAGCC AGAAGAAATG AAATTGGCAC TCCTACGTGG ACAGGTAAGT TTGGCTTAGC TGGTAGGTTT GGCCAGAAGA AGAAAACAGT ATCAGGTAGG ATAAATAAAT CTAGTGGCTC TGGTGTGCTA TCGTCAGAGT CGATTTTAGG AGAGTTGAAG CAGAAGAAAG CAGTCAGAGC TTCTGTGTTC ACCAAAAAAT CCAATTCCAG TGAAAATAAT GAAGCTGTGG ATAAGAAGGC CACAATCGAG AAATTGGTTA CTTTCTTGCA ATCTCGGCCA GATTCGTTCG GAACGTCGCT GGTGATCTTG AAGAATGCTG GTGTTGCCAT GAAAGACGAA AACGACATGA TCCTTATTCG CTCAATGCTA CGGGAGATTG CTGTATGGGA TTCTGGTAGA AGTGGATGGA AGTTGAAGAA AGAATTCTCT CAGAATGAAG AATTGTAA
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Protein sequence | MSEFNRDLEA LGAKLVDQDS LETSITRRAN EALLSKDAEL DQKRLEKATK DLNSTLKRIS ILESRLNNPR TKLSERQKLR DEIKWFEQNE LVPRRRDVED ITARLEESKK QLDGAQSAKE GNTLPGETEK EFLIRTGKIT AFGNINSFQQ IGQETEQVKS HVFLRAPGFE DTQTMKIEKR KEDFDMDNTD RDQDFQDTQE DLGEDSDEES STTYLRNVDD GDELVYQQRL RQWVSRRASL RGTEVSDSSK QEWFKPHPTI PDAVLNNQFK LPGDIYPSLF DYQKTCVQWL WELYSQKTGG IIGDEMGLGK TIQVISFVAG LHYSGLLDKP VLVVVPATVL NQWVNEFHRW WPPLRCIILH SIGSGMGKSA VRSEEKLEEF LENSDPTQSK NSLRGINSQI NAKEIVDRVM EKGHVLVTTY VGLRIYSKHI LPREWGYVVL DEGHKIRNPD SDISLTCKQI KTYNRIILSG TPIQNNLIEL WSLFDFVFPG RLGTLPVFQQ QFSIPINMGG YANASNIQVQ TGYKCAVILR DLISPYLLRR LKSDVAQDLP KKNEMVLFVK LTQVQQELYE KFLHSEELSS ILKGRRNVLM GVDILRKICN HPDLVNRDIL EHKKNYNYGN PVKSGKMQVL KNLLQLWQSQ EHKTLLFCQT RQMLDILEKF VANLRLLDID HEYFTYLRMD GSTPIAKRQD LVDKFNSDPN LHVFLLTTKV GGLGVNLTGA DRVIIYDPDW NPSTDIQARE RAWRLGQKKD ITIYRLMTTG SIEEKIYHRQ IFKTFLTNKI LKDPKQRRFF KVNDLHDLFT LGDQNEVGTE TGDMFNGSET NFGGNKTRAP STLLKKKHKN DDDFYKVASI TGVSKLDKFQ GDEEEEEVSG ESRDENRIME GIFANSGVHS ALKHDEIINS SNQEMSLVEK EASKVANEAA SALKRSRKLA RRNEIGTPTW TGKFGLAGRF GQKKKTVSGR INKSKSILGE LKQKKAVRAS VFTKKSNSSE NNEAVDKKAT IEKLVTFLQS RPDSFGTSSV ILKNAGVAMK DENDMILIRS MLREIAVWDS GRSGWKLKKE FSQNEEL
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