Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_55152 |
Symbol | HEM14 |
ID | 4837439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 1809215 |
End bp | 1810876 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640388754 |
Product | mitochondrial protoporphyrinogen oxidase |
Protein accession | XP_001383118 |
Protein GI | 150864343 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTGG CAAGTATTCC ATCTAATGGT AAAGTCGCAG TAATAGGAGC CGGAGTTTCG GGACTTTCTC TAGCCTACTT TCTTCTGAAA CTTCGTCCAG ATGTGAATAT TGAAATCTTT GAGAAAGAAA GTCGGGTGGG TGGTTGGATA AAGTCAGAAA ACTTACAAAT TGGATCTGGC AGTCAGACGC AAAAGCTCAT ATTCGAAAAG GGGCCAAGAA CTCTTAGAGG AGTAAGTCCG GGCACTCTTC TTATAGTGGA TATATTGAAG CAGCTTAACA AGGCTGCTGA AATAGAGGTG ATAACCAAGA CTTCTCCTGC CAACAAAAAG TATATCTTGA GTGAATCGCG TGGAATCTTG CAAGTTCCAG ATAGCATTGG GAGTTTTTTC AAGTTTCTCT TTAATAGTGG ACTCTTCAAT TCTCAGCTAG TCTTTGGGAT ATTAAAAGAG CCTTTCCGGA AAAAGGGACC GGCTGGTGAT GAATCTATCG ACAGTTTCTT CTTGAGGAGA TTTGGCACTG GTGTGTTGAC TAATAATGTG GTAAGTGCTG TAATGCACGG AATTGTAGCT GGAGACACTG CTCATTTAAG CATTAACACT ATGTTTCCAA AATTGAAGCA ATTGGAACAA GAGCATGGCT CTATAATTAG AGGCATGGTT GCAAGAGCCT GGGCTAGTAG AAAAAAAGCC CAAGAAGTTT TAGCCGATGA GAACGTGCCT AAGGCTCTTC AATTGTATGA GAAGTATATT TCACCTGAGG CTCATTTAGA CAAAATGTCC ATTAGTCTTA AAAAGTACCC CATGATCAGA TTGAATGATG GTTTGGAAGG CTTCCCTGCT TCTGTATATG AATACTTGGC TCAACAGAAG AAGGTCAATT TTAATTTCAA CAGTGACATA GTAGCCTTGG ATCCGGAAAA GGGTTCGATA ACTTTCAAAA ATAGTTCAAC GGCTGTATTT GACCACATCA ACACCTCTAC CAGTGCCAAT GTCTTGACAA AGATTCTCCC CAAAACTAGT GCCTATGATG AAGTGAAGCG CTCGCTCGCT TCTATCCCAT ATGTTAGTGT TTTCTTAGTC AATATCTACA CTCCATCAGG CAAATTGATC CCTAAAAACA ACCACGGTTT TGGCTTCTTG GTTCCCAAAC TTTCTGGAAA TATTGACAGC AACCCGGATT TACTTTTGGG AGTAATTTTT GACTCAGATG TGGAAAAGAA TTCTGTGCAA ATGCTGACTT TCGCTACTTC TCCTCATATT AATGAAGGAT ATAGTAAGAT TACTTTGATG ATGGGAGGTC ACTACTATAA CGACTTCCTG ATCCCTTCCA ATAGCAGGAA TCTAAAGATT GTGAAAGGCT TGCTTTCGAA GTATTTGGAT ATAGACATCG ATAATTACAA TTTCATCTTG AGGGACGAAG CCACACTAGA CGATAAGAAA ATCGGTCTAT TGACTGAAAA TGATATCCTC ATATCCTACA ATCTTCACGA AAAATGCATT CCCCAGTATA CTGTGGGTTA CAATGAAGCC AAAGAGACTA CATTGGGTGT TTTGGAAAAA CTCAATTCAA AGCTATCGTT TGGCGGAACA CTTTTTGGTG CTGGTATTGG AGTTCCAGAC GCTGTTAGCA ACGGATTGGA AATTGCATTA AAACTAAAAT AA
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Protein sequence | MSLASIPSNG KVAVIGAGVS GLSLAYFLSK LRPDVNIEIF EKESRVGGWI KSENLQIGSG SQTQKLIFEK GPRTLRGVSP GTLLIVDILK QLNKAAEIEV ITKTSPANKK YILSESRGIL QVPDSIGSFF KFLFNSGLFN SQLVFGILKE PFRKKGPAGD ESIDSFFLRR FGTGVLTNNV VSAVMHGIVA GDTAHLSINT MFPKLKQLEQ EHGSIIRGMV ARAWASRKKA QEVLADENVP KALQLYEKYI SPEAHLDKMS ISLKKYPMIR LNDGLEGFPA SVYEYLAQQK KVNFNFNSDI VALDPEKGSI TFKNSSTAVF DHINTSTSAN VLTKILPKTS AYDEVKRSLA SIPYVSVFLV NIYTPSGKLI PKNNHGFGFL VPKLSGNIDS NPDLLLGVIF DSDVEKNSVQ MSTFATSPHI NEGYSKITLM MGGHYYNDFS IPSNSRNLKI VKGLLSKYLD IDIDNYNFIL RDEATLDDKK IGLLTENDIL ISYNLHEKCI PQYTVGYNEA KETTLGVLEK LNSKLSFGGT LFGAGIGVPD AVSNGLEIAL KLK
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