Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_53135 |
Symbol | |
ID | 4851667 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 2495908 |
End bp | 2497221 |
Gene Length | 1314 bp |
Protein Length | 432 aa |
Translation table | |
GC content | 42% |
IMG OID | 640393375 |
Product | predicted protein |
Protein accession | XP_001386813 |
Protein GI | 126275206 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0768437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAATG AACAAATCCC ATTGGATTCC CGTATTGTTA TAGTTGGTGC CGGTACTTTT GGACTTTCCA CCGGTTTGGA GCTTTTGAGA AAAGGGTACA AGACTGTTAC TCTTGTTGAT CCTTACCCCC CTCCATCCCC ATTAAGTGCT GGTAACGATG TCAACAAGAT AGTCCAGTCC ACCGTTGATA ACAAGTTTCT TTCGGAATTG GCGTTGGAAG CTTTACAACT TTGGAGAAAT GATCCAATCT ACAGAGATGC GTTCCACGAG ACTGGAATTA TCTACGCTGC TACAAACGAA AAGATACACG ATATTCAGGA TAGAAGAAAG AGGTTGGAAA AATTAGGAAT TGAGCACTCG GCCTTGGATG GGTCACAAGA TTTTGCCAAA GTTATTCCAA GTTTGACTGG GTCAGATGAT AATAGTTCTA GATTCAGGAA TTGGGTAGGT TTCCACCAAA AGAAGAACTG TGGATGGGCT TTTGCCAGAT TGGCATTGGA ATTTGCTGCG AATGAAATCA GAAAATTGGG AGGGCAATTC GAAATAGCCA ATGTTGAGGA ACTCGTGTTC AACCAAGATA CGGTAATTGG AGTGAGAACA ACTACTGGCC AGGTAATCAA AGGTGACAAG GTGGTGATTT GTGCGGGAGC CAAATCGGAC CAGATCTTGG ACTTCGAAAA CCAGCTATTA GCCAAATGCT TTACGGTAGT TCATATTGAG CTTTTGCCGT GTGAGGTTGA ACTGCTTAAA AACTTGCCCG TAGTATTGAA TCTTGATCAA GGCTTCTTCT TTGAGCCCGA TAAGAAAAAT CATTTGAAGA TCTGCAACGA ATTTCCTGGC TACATAAATT TTTCAGAAGA CTCGACAATT TCCAAACCGG TATATCTTGA TAAAATCCCC CAGGAAGCCG AAAAGCAGAT TAGAATATTC TTAAAAGAGA CATTCCCAAA TCTATCAGCT CGCCCATTTG CGGTGACAAA AATATGTTGG TGCACAGATA CTTCCGATAG GAACTTCCTT ATTGGAACGC ACCCAAAGCA CAAAAACCTA ATTCTTGGCA CGGGAGATTC TGGACAAGGC TTCAAGTATA TGCCAGTAAT TGGAAAATAT ATAGCCAGCG TGGTGTCGAA CGGACCAGAA AGTCTACCAC CGGATATAGA ACGGTTTTGG AGATGGAGAC CAGAGAGTAC GACTAACAGA GATGTCTACG ATCTCCAGAA CAGGTATGGT GGATCTAATC AGGTGAAAAA TTTGCTAGAC ATCAAGCATT GGAGCAGCAG TAAAAATAAT AGTAGTGATG CGGCCAAGTT TTAG
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Protein sequence | MVNEQIPLDS RIVIVGAGTF GLSTGLELLR KGYKTVTLVD PYPPPSPLSA GNDVNKIVQS TVDNKFLSEL ALEALQLWRN DPIYRDAFHE TGIIYAATNE KIHDIQDRRK RLEKLGIEHS ALDGSQDFAK VIPSLTGSRF RNWVGFHQKK NCGWAFARLA LEFAANEIRK LGGQFEIANV EELVFNQDTV IGVRTTTGQV IKGDKVVICA GAKSDQILDF ENQLLAKCFT VVHIELLPCE VELLKNLPVV LNLDQGFFFE PDKKNHLKIC NEFPGYINFS EDSTISKPVY LDKIPQEAEK QIRIFLKETF PNLSARPFAV TKICWCTDTS DRNFLIGTHP KHKNLILGTG DSGQGFKYMP VIGKYIASVV SNGPESLPPD IERFWRWRPE STTNRDVYDL QNRYGGSNQV KNLLDIKHWS SSKNNSSDAA KF
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