| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52887 |
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| Symbol | RPT5 |
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| ID | 4850834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 187966 |
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| End bp | 189249 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640392542 |
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| Product | 26S proteasome regulatory subunit |
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| Protein accession | XP_001387688 |
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| Protein GI | 126273629 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAACCT TGGAAGAATT GGAAAACAAC CATGATGACT TTTTCGACCA GGAGATTTTG
AACTCGGCCA CTTCCGACAT CATCAACCGT ACCAAACTAT TGGATAACGA CATCAAGGTG
ATGAGACTGG AGTCACAGCG TTTAACCCAC GAGAAGACGG TGATGTTAGA GCGTATCAAG
GACAACCAGG AAAAGATCAA CAATAATAAA CAGTTGCCTT ATTTGGTTGG TAACGTTGTA
GAGTTACTTG ATCTTGATGC TGAAAAGGAA GCCTCGGAAC AAGGAGCTAA TGTAGACTTA
GACGCTGCCA GATCTGGCAA GTCTGCCGTG ATCAAAACTT CTACGAGACA GACCATCTTC
TTGCCGTTGA TTGGCCTCGT AGATCCAGCC AAATTGAAGC CCAATGACTT AATTGGTGTC
AACAAGGACT CGTACTTGAT ATTGGATACG TTGCCCTCGG AATACGACTC ACGTGTCAAG
GCCATGGAAG TGGATGAGAA ACCCACGGAA GACTATTCAG ACATTGGTGG GTTGGATAAA
CAGATCGAAG AGCTCATTGA AGCCGTAGTT CTCCCCATGA AACAGGCAGA GAAGTTCACC
AACCTCGGAA TTAAACCACC GAAGGGTGCC CTTATGTATG GACCACCAGG TACGGGGAAG
ACGTTGTTGG CCAGAGCATG TGCTGCCCAA TCTGGGGCTA CTTTCTTGAA GTTGGCAGCT
CCCCAGTTGG TTCAAATGTT CATTGGTGAT GGTGCCAAGT TGGTTCGTGA TGCCTTTGCC
TTGGCCAAAG AGAAGGCTCC TACGATCATA TTTATCGACG AATTAGACGC TATCGGAACA
AAGAGATTCG ATTCTGATAA AAGTGGAGAC AGAGAAGTCC AGAGAACCAT GTTGGAGTTA
TTGAACCAGT TGGATGGGTT CGATTCTGAT GATAGAGTCA AGGTGTTGGC TGCAACGAAT
CGTGTAGATA CCTTAGATCC CGCTCTTTTG AGATCGGGAA GATTGGACAG AAAGATTGAA
TTTCCTTTAC CTTCAGAAGA AGCCAGAGAG TCAGTTCTAA AGATCCATGC CAGAAAGTTG
AACTGCGACA ACAACTCAGT CAACTGGAGA GAATTGGCCA GGTCCACTGA CGAATTCAAC
GGAGCGCAAT TGAAGGCTGT CACTGTCGAA GCAGGTATGA TTGCATTGAG AAACGGCAAG
TCTATAATAA AGCACGAAGA CTTTGTTGAG GCTATCGGCG AAGTCCAGGC CAGAAAGTCG
AAATCGGTCA ACTTCTACGC CTGA
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| Protein sequence | MSTLEELENN HDDFFDQEIL NSATSDIINR TKLLDNDIKV MRLESQRLTH EKTVMLERIK
DNQEKINNNK QLPYLVGNVV ELLDLDAEKE ASEQGANVDL DAARSGKSAV IKTSTRQTIF
LPLIGLVDPA KLKPNDLIGV NKDSYLILDT LPSEYDSRVK AMEVDEKPTE DYSDIGGLDK
QIEELIEAVV LPMKQAEKFT NLGIKPPKGA LMYGPPGTGK TLLARACAAQ SGATFLKLAA
PQLVQMFIGD GAKLVRDAFA LAKEKAPTII FIDELDAIGT KRFDSDKSGD REVQRTMLEL
LNQLDGFDSD DRVKVLAATN RVDTLDPALL RSGRLDRKIE FPLPSEEARE SVLKIHARKL
NCDNNSVNWR ELARSTDEFN GAQLKAVTVE AGMIALRNGK SIIKHEDFVE AIGEVQARKS
KSVNFYA
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