Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_50417 |
Symbol | URA3 |
ID | 4840866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 357829 |
End bp | 358632 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640392181 |
Product | Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) (Uridine 5'-monophosphate synthase) (UMP synthase) (PYRF) |
Protein accession | XP_001386655 |
Protein GI | 126140266 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.571106 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAACG TCCAAACCTA TACACAAAGG GCCGAGTCTC ACCAGTCACC GGTAGCACAG CGTCTCTTCA AATTAATGGA CAGCAAGAAA ACTAACTTGT GTGCTTCAGT GGATGTGAAA ACAACCTCTG AGTTCTTATC TTTGATTGAT AAGTTGGGTC CTTACATTTG TTTGGTTAAG ACCCATATCG ACATTATCGA CGATTTTTCG TATGAAGGTA CCATTGTTCC TTTGTTGGAA TTGTCCAAGA AGCACAACTT CATGATCTTT GAAGATCGTA AATTCGCAGA CATTGGAAAC ACTGTCAAGT CTCAGTATTC AGGTGGAGTC TACAAGATTG CCCAATGGTC AGATATCACC AATGCTCACG GTGTTACTGG TTCTGGTATT GTTCAGGGAT TAAAGGAAGC TGCAAGAGAA ACTACCGACG AACCAAGAGG TTTATTGATG CTTGCCGAAC TATCTTCTAA GGGCTCGATT GCTCATGGTA AGTATACTGA AGAAACTGTG GAAATCGCCA AAACTGACAA AGAGTTTGTT ATTGGGTTCA TTGCCCAAAG AGACATGGGT GGACAAGATG AAGGTTTCGA TTGGATTGTT ATGACTCCTG GTGTCGGTTT GGATGACAAG GGTGACAGTT TAGGTCAACA ATATAGAACA GTAGATGAAG TTGTTTCCAC AGGAACCGAT ATTATCATTG TTGGTAGAGG CTTATTCGGC AAGGGTAGAG ATCCTGATGT AGAGGGCCAA AGATACAGAG AAGCTGGATG GAACGCTTAC TTGAAGAAGA CAAGCCAAGT GTAA
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Protein sequence | MVNVQTYTQR AESHQSPVAQ RLFKLMDSKK TNLCASVDVK TTSEFLSLID KLGPYICLVK THIDIIDDFS YEGTIVPLLE LSKKHNFMIF EDRKFADIGN TVKSQYSGGV YKIAQWSDIT NAHGVTGSGI VQGLKEAARE TTDEPRGLLM LAELSSKGSI AHGKYTEETV EIAKTDKEFV IGFIAQRDMG GQDEGFDWIV MTPGVGLDDK GDSLGQQYRT VDEVVSTGTD IIIVGRGLFG KGRDPDVEGQ RYREAGWNAY LKKTSQV
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