| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50192 |
|---|
| Symbol | |
|---|
| ID | 4840884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | + |
|---|
| Start bp | 265747 |
|---|
| End bp | 266820 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640392199 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386450 |
|---|
| Protein GI | 150866753 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01126] protein disulfide-isomerase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000211726 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TCGAATCTCC TCCAGGTGAA TGACAAAAAT TTCAAAGAGA TTGTCATTGA CTCCGGTAAA
TTCACCTTCG TAGATTTCTA TGCTGACTGG TGTCGTCATT GCAAGAACTT GATGCCAACA
ATTGAAGAAC TTGCAGATGT TTTCGAGCCA TTCCAAGACC AAGTCCAAGT TGTGAAAATA
AACGGAGACA AGGACGGAAA GAAGATGTCT AAGAAATACG TCTTCAAAGG CTATCCAACC
ATGTTGCTTT TCCACGGCAA CGATGAACCA GTTGAATATG ACGGTATTAG GGATTTGCAG
GCTTTGAGCA ATTTTGTTCA ACAAATCACA GGAGTCAGAT TAGCAAGCAT AAAACCGGAA
GGGGAGGTCG AAGAGTCTAA GGTAGAACAG GAACCAACTG GTTTGATTCG ATTGAATGAT
ATCAATTTTG AAGACAAAAT TAGAGAGACT CCGTATTCAA TTGTAGTATT CACTGCCACT
TGGTGTCAAT TCTGTCAGAA GTTAAAGCCG GTACTTGAAA CTCTTGTTGA TGTCGTATTC
GCCAACGAGA AAGAAAAAAT ACAGATAGCA ATTGTGGAGC TTGACACGGA ACCCGGAGAC
AAACTAAGTG ATAGATACCA CATACTGACG TTACCAACAA TCCTCTTCTT CAGTAATGAG
TATGATGAAC CTAGCATATA TGATGGTGAA AAGGAATTAT TGCCTTTGCT TGCCCTGATC
AATGAATTCA CAGACTCACA CCGCGACGTT GAAGGAAGGC TTTCTAATAC TGCGGGGAGA
ATTCAAGAAG TTGACAATTT GATTAGCCAG AAGATTTTAC AAGGATTCAA AGGAGATTTG
AGTACAGCAG GAATAGAGCT TTTAGGCGAA ATTTCACATT TATCAAATGA GAATTACGAG
ATGCTTCCCT ATTATAAGAA GTTGGTAAGC AAGATCATAA ATAATGAAAT GGACTTCTTC
AAGAATGAGT TTTCCAGATT AGCGACTATA TTGGAGAATG ACATCTCAAA ATTGACGCCA
AATACAATCG ACTCGATGCA AAAGAGATCT AATATTTTAT CTTCATTTAT CTAG
|
|---|
| Protein sequence | SNLLQVNDKN FKEIVIDSGK FTFVDFYADW CRHCKNLMPT IEELADVFEP FQDQVQVVKI
NGDKDGKKMS KKYVFKGYPT MLLFHGNDEP VEYDGIRDLQ ALSNFVQQIT GVRLASIKPE
GEVEESKVEQ EPTGLIRLND INFEDKIRET PYSIVVFTAT WCQFCQKLKP VLETLVDVVF
ANEKEKIQIA IVELDTEPGD KLSDRYHIST LPTILFFSNE YDEPSIYDGE KELLPLLASI
NEFTDSHRDV EGRLSNTAGR IQEVDNLISQ KILQGFKGDL STAGIELLGE ISHLSNENYE
MLPYYKKLVS KIINNEMDFF KNEFSRLATI LENDISKLTP NTIDSMQKRS NILSSFI
|
|---|
| |