Gene PICST_47463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_47463 
SymbolGLN2 
ID4839668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1269297 
End bp1270202 
Gene Length906 bp 
Protein Length301 aa 
Translation table12 
GC content42% 
IMG OID640390983 
ProductPredicted glutamine synthetase glutamine amidotransferase 
Protein accessionXP_001385250 
Protein GI126137453 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.881138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCA CCGAAAACCA CATTGCTATC CTCGTTTGCG ACTGGAGTAT CCCTACCGTT 
ACAGAAAAGT ATGGAGACTT TGGTGATAAT ACCAGAGATC TACTCGATGA GGCCGCTAAC
AAAAACAGAA GCCCATATCC TCTCGTCAAG TACCAAGTTG CGTTTCCAGA AGATGGCGAA
GAAGGCAACG AACCAAAATA TGTCTCTGAA TTAGAGCAAG TTTACATTAA ATTGAAAGAG
GATATTGAAT CAGGAATCGT TAAAGGTGTG ATTTTGACTG GATCGCGCTG CGATTCGTTT
GTAAGAGACA TTGCCTGGAT CTCTCGTTTG AACCAGTTCA TTCAACAAGT CCTTTTCAAC
TTGGAAAACT TTCCTATTGT TGGCATCTGC TTTGGACATC AAATCTTGGG TTTGAACCTT
GGTGCCAAAG TTGGCAGAAA CTTACCTGAA GTAGGGTGGG AGTGTGGAAC TACCACCATC
AACTTGAACA AGGATATCTT GTCGGTCAGA GATTCTCCAT TTGTAAACGT TTTGAAGACA
GAAGACGATA AATTTCTTGA ACACATCAAC TTGGTGGAAT TCCACCAGGA CATTGTCTAC
GGATTACCTC CTCCAAATAC AGGTACGGCA ACTAAGTTCT TATCTATTGG TTCTACGAGC
AAGTGCTCGA TCCAGGGCTT ATTGACTGAA GAAGGCCCAT TGAAGGTGCT CACATTCCAG
GGTCATCCAG AATTCACTAC GCCAATTGCT CTCGATCTTT TGAAATACGA TCATTCCAAG
GGTTTATTGA ATGATAACGA AGCAGAGAAA TTCACTTATA ACACTCAAAG CTTGAACAAC
CAAGGCCCTG TCATTGGAAA GGTTATTGAT GAATTCATTT CCATTCACAA CACTCACAAA
CCATAA
 
Protein sequence
MTITENHIAI LVCDWSIPTV TEKYGDFGDN TRDLLDEAAN KNRSPYPLVK YQVAFPEDGE 
EGNEPKYVSE LEQVYIKLKE DIESGIVKGV ILTGSRCDSF VRDIAWISRL NQFIQQVLFN
LENFPIVGIC FGHQILGLNL GAKVGRNLPE VGWECGTTTI NLNKDILSVR DSPFVNVLKT
EDDKFLEHIN LVEFHQDIVY GLPPPNTGTA TKFLSIGSTS KCSIQGLLTE EGPLKVLTFQ
GHPEFTTPIA LDLLKYDHSK GLLNDNEAEK FTYNTQSLNN QGPVIGKVID EFISIHNTHK
P