Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_45065 |
Symbol | |
ID | 4838753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1757520 |
End bp | 1758824 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390068 |
Product | predicted protein |
Protein accession | XP_001384646 |
Protein GI | 150865431 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.368753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCTT CGGATCCCAC TTCTTTGCAC AACCCTTACT TCTACCAGAA GCCAGGACAG AAGGACATAT GGTCGTTGAT TAACGAAACT GCTGCCGAAG CTCAGGCCCA ATCGGGAAAG CCCATAGTCA ACTTAGGCCA GGGCTTCTTC TCGTACAACC CTCCCAAGTT TGCAACTGAA GCTGTGAATG AAGCCTTGAC CAAACCGCAG TTCAACCAGT ATGCTCATGC CAGAGGTAAT CCTAACTTAA TAAAGGAGGT TGCCGCCCAC TACCTGAAGT CGTTTGGCCG TCCTGTTGAC ACCTCTGAGA TCCAGATCAC CACCGGAGCC AATGAAGGGA TGTTCTCTGT ATTCTTTGGC TTCTTAACTC CAGGCGACGA AGCCATTGTT TTCGAGCCAT TCTTCGACCA ATACATTCCA AACATCGAAA TGACAGGCGC AAAAGTGAGA TATGTCGAAT TGAACTATCC AGAAAAGTTC AACGACAAAA CTGTCACTGG TGACGACTGG GAAGTGGACT GGGAAGGCTT GGAAGCTGCT ATCAACGAAA AGACAAAGAT CATTGTCATC AACACGCCAC ACAACCCCAT CGGCAAGATC TTTACCGAAG AAGAGTTGTT GAAAATTGGC CAACTTGCCA TCAAGCACAA TTTGATTCTT GTCTCTGACG AAGTTTACGA AAATTTGTAC TTCACACCTT CTTTCCCCAG ACCTGCTGCT TTGGCGAAAT TGCCTCAATT GGCTGATAGA ACTTTGACTA TCGGCTCTGC TGGAAAATCC TTTGCTGCAA CTGGTTGGAG AGTCGGATTT GTGCACGGTC CAGCTAACTT GATCAAGTTT GTCACGGCTG CCCATACGAG AATTTGTTTC TCCACTCCTG CGCCATTGCA ACAAGCTGTA GCTCAAGGTT TCATCGAGGC TGCCAAAGTT GATTACTTCG AAAAGACTAG ACAGGAGTAT ATCAAAAAGT ACGAAGTTTT TACTAAGGTG TTCGACGATT TGGGCTTCCC TTACACCGTA GCTCAAGGTG GATACTTTTT ATTGGTCAAC TTACTGAAGT TGAAGATTCC TGATGACTAC GAGTATCCAC CAGCAATTGC CGACAGAGGA ACCTTAGACT TCAAGTTGGC CTACTGGTTG ATCAAAGAAA TCGGAGTTGT CGGTATCCCA CCAACGGAAT TCTTGATTCC CGACAACAGA AAGGGCAATG GCTTAGAGAA GTGTTTAAGA TTCGCTGTCT GCAAGGATGA CCACATCTTG GAAGATGCAA TTGAAAGATT GAGGAAGTTG AAAGATTATA TTTAG
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Protein sequence | MSSSDPTSLH NPYFYQKPGQ KDIWSLINET AAEAQAQSGK PIVNLGQGFF SYNPPKFATE AVNEALTKPQ FNQYAHARGN PNLIKEVAAH YSKSFGRPVD TSEIQITTGA NEGMFSVFFG FLTPGDEAIV FEPFFDQYIP NIEMTGAKVR YVELNYPEKF NDKTVTGDDW EVDWEGLEAA INEKTKIIVI NTPHNPIGKI FTEEELLKIG QLAIKHNLIL VSDEVYENLY FTPSFPRPAA LAKLPQLADR TLTIGSAGKS FAATGWRVGF VHGPANLIKF VTAAHTRICF STPAPLQQAV AQGFIEAAKV DYFEKTRQEY IKKYEVFTKV FDDLGFPYTV AQGGYFLLVN LSKLKIPDDY EYPPAIADRG TLDFKLAYWL IKEIGVVGIP PTEFLIPDNR KGNGLEKCLR FAVCKDDHIL EDAIERLRKL KDYI
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