Gene PICST_44069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44069 
Symbol 
ID4837761 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1764774 
End bp1766090 
Gene Length1317 bp 
Protein Length414 aa 
Translation table12 
GC content42% 
IMG OID640389076 
Producthypothetical protein 
Protein accessionXP_001383955 
Protein GI150864936 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.550726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAA TACCTGAATT AGTGGTTGAT TTGGATGAAA TTTCAGAAGT GCAACCGAAG 
CAACAACAAT TTCATCCAAA CGTTCAGAAC AGCATATCTG AAAATGCTGC TACTCTCAAG
ACAATTTCTA CTCCACAATC CATATCATCT AGTACTACAG CAGCAGACTC GGAGAACGAT
GCTGAGACAA AAAGAAAGAT TCCCATCACA ATTATTACAG GCTATTTGGG TTCAGGCAAG
TCGACACTCT TGGAACTGAT AGGAAAAAGA TCAAAAAAGA GGTTAGCTAT CATATTGAAT
GAGTTTGGTG ATTCCTCGGT GATTGAAAAA TCCATCACCA TTAAAGACGC AGAAAAGAAC
GAGTCGATCC AGGAATGGTT GGATTTGGGC AACGGCTGCT TGTGCTGCAC CGTTAAGGAT
AACGGCGTTG TAGCCATTGA ACAGTTGATA GAAAACTCCA GAGACAAGAT CGATTACATA
TTGTTGGAAA CTACAGGCAT CGCTGATCCT GCACCTATTG CGAAGATGTT CTGGATAGAC
CAGGGGCTTT CCTCCAATAT CTATATAGAC GGAGTAATCA CAGTGGTAGA CTCGGAACAT
ATTGTTCGTT GCTTAGATGA TGTAGGTGGT CATTGGCACC GGGAGCACAA GCATTTACTT
GAGGCCCAGA CATCCAATAA GGAGGACTTA ACCGAAGAGG AAATCGCAGC AGAGGCTAGT
AAGCTTAACG AAGGCATAAC CACAGCTCAT TTGCAAATTG CATTGGCTGA CACGATTTTG
GTGAACAAGA TTGATAGACT AGAACATAGT GATGTCGACC TCGAACAGAT CACCAAGCGT
ATCAGAGACA TCAATCTCAG CTCACCTATA CACACTACTA GTTTTGGCGA TATCGATCTA
GACAAGATCC TTGATCTCCA TGCTTTTGAG CCGAACGTAG AGAAATTGCA AAAGTCCATA
AATGTAAAGG ACATGGCCAC ATTTCACGAT AGCAGAATTA CTACTGTGAC GTTGGATTTT
GAATTTTTCG TATCTGACAA CCAGTTTGAC CAGATCGAGT CCTTCTTCCA GCATGTTCTT
TGGGAGAAGC TTATCAACTC CAAAGAGATA GAAATCCACA GAATGAAGGG ATTATTGGTG
AAGAAGAATG GAGATGAATT ACCAGACGTG AGGGTTGTTC AGGGTGTAAG GGACACGTAC
GATATCATAA GCGGTGGAGT GTTGATAGAG GGAGTTGAGA ATAACAAGTT GGTTTTTATA
GGCAAAAATC TTGACAAGGA TGACTTGTTG GTAGAGTTGA AGAGTTTCTT GAGGTAG
 
Protein sequence
MDEIPELVVD LDEISETIST PQSISSSTTA ADSENDAETK RKIPITIITG YLGSGKSTLL 
ESIGKRSKKR LAIILNEFGD SSVIEKSITI KDAEKNESIQ EWLDLGNGCL CCTVKDNGVV
AIEQLIENSR DKIDYILLET TGIADPAPIA KMFWIDQGLS SNIYIDGVIT VVDSEHIVRC
LDDVGGHWHR EHKHLLEAQT SNKEDLTEEE IAAEASKLNE GITTAHLQIA LADTILVNKI
DRLEHSDVDL EQITKRIRDI NLSSPIHTTS FGDIDLDKIL DLHAFEPNVE KLQKSINVKD
MATFHDSRIT TVTLDFEFFV SDNQFDQIES FFQHVLWEKL INSKEIEIHR MKGLLVKKNG
DELPDVRVVQ GVRDTYDIIS GGVLIEGVEN NKLVFIGKNL DKDDLLVELK SFLR