| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_43920 |
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| Symbol | SNF4 |
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| ID | 4838012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 657849 |
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| End bp | 658865 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389327 |
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| Product | 5'-AMP-activated protein kinase, gamma subunit |
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| Protein accession | XP_001383761 |
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| Protein GI | 126134473 |
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| COG category | [K] Transcription |
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| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0307188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAG TGTCGTCAGA CTTTGTTGGC TCTGCAACAC CTAACGAGTA CATCTTGAGC
TTATCACCAG AACAAATCGA GCACGACCAG AAAATCGGTG TTCGAGCAAT CAGGTTGTTC
CTCCAGAGTA AGACTTCGTA TGATGTGTTG CCAGTTTCAT ATCGTTTGAT CGTATTGGAC
ACATCGCTTT TGGTCAAAAA GTCTTTAAAC ATATTGCTTC AGAATAATAT CGTGTCAGCA
CCATTGTGGA ATAACCAAAG CTCTCGTTTT GCAGGTTTGT TGACGTCGTC TGACTTTATT
AACGTGATCC AGTACTACTT CCAGTTTCCA GAGAAGTTTG AATTAGTGGA CCAGTTGACC
CTCGATGGTT TAAGAGAAGT AGAGAAGGCT ATTGGTGTGA CGCCCATAGA AACGGTATCG
ATCCATCCCT TCAAGTCGTT GTACGAGGCC TGTGTTAAGA TGTTGGAGTC AAAAGCCAGA
AGAATTCCTT TGATTGACGA AGACGAAAAG ACACACCGTG AGATTGTGGT ATCAGTTTTA
ACACAGTATA GAATCTTAAA GTTCGTGGCC TTAAACTGTA AGGAAACAAA GATGTTGTTG
AAACCCGTCA AAGACTTGCA AGGCTTGGGC ACAATTAAGG ACATTTCCAC ATGTACCATG
AACACTCCTG TAATTGAAGT CATCCACTTG TTGGCCCACA AATCTGTTTC TTCAGTTCCT
ATTGTCGATG CTCAAGGTAA GTTGATTAAC GTCTACGAGG CCGTTGATAT TTTGGCATTG
GTGAAGGGAG GAATGTACAC CGACTTGGAC TTGAGTGTTG GTGATGCATT GTTAAGAAGA
CCAGAAGAGT TTGAGGGTGT TCACACGTGT ACCATGAACG ACAGATTGAG CACCATCATG
GATACCATCA GAAAGTCCAG ATTGCACAGA TTGTTTGTTG TGGACGAAGA GGGCAAGTTG
GTCTCGGTGA TAACGTTGAG TGACATCTTG AACTACATCT TGTTTGGCGA GGACTAG
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| Protein sequence | MTEVSSDFVG SATPNEYILS LSPEQIEHDQ KIGVRAIRLF LQSKTSYDVL PVSYRLIVLD
TSLLVKKSLN ILLQNNIVSA PLWNNQSSRF AGLLTSSDFI NVIQYYFQFP EKFELVDQLT
LDGLREVEKA IGVTPIETVS IHPFKSLYEA CVKMLESKAR RIPLIDEDEK THREIVVSVL
TQYRILKFVA LNCKETKMLL KPVKDLQGLG TIKDISTCTM NTPVIEVIHL LAHKSVSSVP
IVDAQGKLIN VYEAVDILAL VKGGMYTDLD LSVGDALLRR PEEFEGVHTC TMNDRLSTIM
DTIRKSRLHR LFVVDEEGKL VSVITLSDIL NYILFGED
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