| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39160 |
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| Symbol | EGC1 |
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| ID | 4850994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 656267 |
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| End bp | 657718 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640392702 |
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| Product | Endoglucanase C (EGC) (Endo-1,4-beta-glucanase) (Cellulase C) |
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| Protein accession | XP_001387765 |
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| Protein GI | 126273955 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.151498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTACAG GATTCTTAAC CACCAAAGGC ACCAAGATCG TCGATGCCAA CGGCAAACAA
GTTGTTCTTG TTGGTACTGC CATCGCCGGA CACTTAAACA TGGAGAATTT CATCACCGGT
TACCCTGGTC ACGAAACCGA ACATAAGAAT GTGTTGAAGA AGAAGATTGG AGAAGAAAAG
TTCAACTTCT TTTTTGACAA GTTCTACGAG TACTTCTGGA CCGAAAAGGA CGCAGACTTC
TACAAGAACG AATTGGGTTT CAACTGCTTA AGAATTCCTT TTAACTATCG TCACTTTATT
GACGAAGAGG TCGACTTGTT CAAAATTGAT CCAAAAGGTT TCGAAAGGTT GGACAGAGTT
ATCGACATTT GTTCCAAATA CGGTATTTAC ACTGTCTTGG ACTTGCATGC TACTCCAGGT
GGTCAGAACC AGGACTGGCA CGTTGACTCC GGTATCCACA AGTCCAGCTT TTTTGACTTC
AAGGTTTTCC AAGACTCAAT GGTGAACTTG TGGATTGAAC TCGCCAAGCA CTACAAGGAC
AACACATGGG TCGCTGGTTT CAACCCTTTG AACGAGCCTG CCGTTTCGCA ACATAAGAAG
TTGGTTAATT TCTACCAGAG ATTGCACGAC GAAATCAGAC CTATTGACCC TAACCATATC
TTCTTCCTTG ATGCCAACAC CTACTCCATG GACTTCAGAC AATTCCCAGC TCCAAAGGAT
TTCATCCCTA ATGCCGTCTA CTCCATCCAT GACTACTCTA CTTTCGGTTT CCCAAACATC
CAAGGTACCT TGTACACTGC CTCTGATGCT GAAAAGGAAA AGTTGAAGAG ACAATACGAC
CGTAAGGTTG AATACCATCA CGAACACAAT GTTCCCGTCT GGAACGGTGA ATTCGGTCCA
GTCTACGCTT CTAAGGAAAG AGGTGATGAA GACCCAGACA CCATCAACAG AGCTCGTTAC
CAAGTGTTGA AGGACCAATT GGCCATCTAC AAGAAGGGTG ACCCATCTGG TGACGGTACT
CCAATCTCCT GGTCCATTTG GTTGTACAAG GATATTGGTT ACCAAGGTTT GACTTACGTT
GACCCTGAAT CCAAGTGGTA CAAGGTCTTC GGTGAATTCT TATTGAAGAA GAAGAAGTTG
GGTCTCGACA GATGGGGTAA CGACATCGAC CCAGAATATA ACCAGTTGTA TGAAAATTTG
GCAAACCACA TCCTTGAAAA CGTTCCAGAG AAGTACCACC ATGCTCTCTA CCCTCACCAC
TGGACAGTAC TTGATTGGTT GTTCAGAGTT AGCAAAGACC AGTTGTTCTC TCAATACGCT
CAATACGAAT ACGCTGACTT GTTCGTTGGA CTTTCTTTTG AAGAATTGGA TGAACTCGCT
GCTTCTTTCA AGTTTGAAAA CATCAAATTG AGAGATGAAT TGAACGACAT CTTGAAGGAT
TACAAGAATT AA
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| Protein sequence | MSTGFLTTKG TKIVDANGKQ VVLVGTAIAG HLNMENFITG YPGHETEHKN VLKKKIGEEK
FNFFFDKFYE YFWTEKDADF YKNELGFNCL RIPFNYRHFI DEEVDLFKID PKGFERLDRV
IDICSKYGIY TVLDLHATPG GQNQDWHVDS GIHKSSFFDF KVFQDSMVNL WIELAKHYKD
NTWVAGFNPL NEPAVSQHKK LVNFYQRLHD EIRPIDPNHI FFLDANTYSM DFRQFPAPKD
FIPNAVYSIH DYSTFGFPNI QGTLYTASDA EKEKLKRQYD RKVEYHHEHN VPVWNGEFGP
VYASKERGDE DPDTINRARY QVLKDQLAIY KKGDPSGDGT PISWSIWLYK DIGYQGLTYV
DPESKWYKVF GEFLLKKKKL GLDRWGNDID PEYNQLYENL ANHILENVPE KYHHALYPHH
WTVLDWLFRV SKDQLFSQYA QYEYADLFVG LSFEELDELA ASFKFENIKL RDELNDILKD
YKN
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