Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_39100 |
Symbol | YGW1 |
ID | 4851312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 1471563 |
End bp | 1472693 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | |
GC content | 44% |
IMG OID | 640393020 |
Product | conserved protein of the N-type ATP pyrophosphatase superfamily |
Protein accession | XP_001387923 |
Protein GI | 126274332 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR00269] conserved hypothetical protein TIGR00269 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAA TTTCAGCCAA AAAAGTGAAG GTTTCTGCTC TTTGTGAGCT TTGTCATGCC AGAAAGGCTG TGATGAAAAG ACCCAAGAAT CTTCAAAAGC TCTGTAAAGA CTGTTTCTAT AAGGTTTTTG AGACTGAAAT TCACAACACC ATAGTGGACG CTAAACTCTT TCTGCCTGGT GATAAGGTGG CTATCGGAGC CTCTGGAGGA AAGGATTCTA CGGTGCTAGC ATCAGTGTTG AAGACTTTGA ATGAAAGATA TGATTATGGC TTGATCTTGG TACTTCTCTC TATAGACGAA GGCATCAAGG GCTACAGAGA CGATTCGTTA GCTACGGTCA AGAGAAATCA GGTCCAGTAC GAGATGCCTT TGGAAATAAT ATCTTACAGG GACTTATATA ATTGGACTAT GGATGAAATT GTGCTGTGCG CTGGAATAAG ATCTTCGTGC ACTTACTGTG GAGTTTTGAG GCGACAAGCT TTAGACAGAG GAGCGGCCAA GCTCGGAATC AACCATGTAG TAACTGGCCA TAACGCAGAT GATATGGCTG AGACCGTGTT GATGAATCTT TTGCGTGGTG ACACTGCCAG ATTGGAAAAA TCCTGTGCCA TTATCACTCA GTCTGCTGGG TCTCCTATCA AGAGGTCCAA GCCTTTCAAA TACACGTACC AGAAGGAGAT TGTGCTATAT GCTCATTACA AGAAGCTTGA CTACTTTTCT ACCGAATGTA CTTACGCTCC TGAAGCATTT AGAGGCACAG CACGTGAGTT GTTGAAGTCG TTGGAGTCCA TAAGACCTTC TTGTATTATG GACATCATAT ACAGTGGAGA ACATTTGGTA CTAGCTCCAA AGAAAAAGAA GATCACGACA CTGTACAAGA CAAACAAGAA GAAAACGCAT ACGGAGAACG AAGTCAACGC TGACGGCTCT GTGTCGTTGG GAAGAAAGAA GCAGTTTGAA GACGGAAACA GATGTGAGAA GTGTGGTTAC TTGTCCTCCA ACAGAATCTG CAAGGCATGT ATGCTTCTTG CTGGTTTGGA GATGAATAGA GCCAAAGTGA GCATAGACAA CAACACGGCT GTGGACGGCG CAGCTGTGTT GACCAGAACC TTAGAACAAT TGAGTTTCTA G
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Protein sequence | MTEISAKKVK VSALCELCHA RKAVMKRPKN LQKLCKDCFY KVFETEIHNT IVDAKLFLPG DKVAIGASGG KDSTVLASVL KTLNERYDYG LILVLLSIDE GIKGYRDDSL ATVKRNQVQY EMPLEIISYR DLYNWTMDEI VLCAGIRSSC TYCGVLRRQA LDRGAAKLGI NHVVTGHNAD DMAETVLMNL LRGDTARLEK SCAIITQSAG SPIKRSKPFK YTYQKEIVLY AHYKKLDYFS TECTYAPEAF RGTARELLKS LESIRPSCIM DIIYSGEHLV LAPKKKKITT LYKTNKKKTH TENEVNADGS VSLGRKKQFE DGNRCEKCGY LSSNRICKAC MLLAGLEMNR AKVSIDNNTA VDGAAVLTRT LEQLSF
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