Gene PICST_39100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_39100 
SymbolYGW1 
ID4851312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1471563 
End bp1472693 
Gene Length1131 bp 
Protein Length376 aa 
Translation table 
GC content44% 
IMG OID640393020 
Productconserved protein of the N-type ATP pyrophosphatase superfamily 
Protein accessionXP_001387923 
Protein GI126274332 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR00269] conserved hypothetical protein TIGR00269 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA TTTCAGCCAA AAAAGTGAAG GTTTCTGCTC TTTGTGAGCT TTGTCATGCC 
AGAAAGGCTG TGATGAAAAG ACCCAAGAAT CTTCAAAAGC TCTGTAAAGA CTGTTTCTAT
AAGGTTTTTG AGACTGAAAT TCACAACACC ATAGTGGACG CTAAACTCTT TCTGCCTGGT
GATAAGGTGG CTATCGGAGC CTCTGGAGGA AAGGATTCTA CGGTGCTAGC ATCAGTGTTG
AAGACTTTGA ATGAAAGATA TGATTATGGC TTGATCTTGG TACTTCTCTC TATAGACGAA
GGCATCAAGG GCTACAGAGA CGATTCGTTA GCTACGGTCA AGAGAAATCA GGTCCAGTAC
GAGATGCCTT TGGAAATAAT ATCTTACAGG GACTTATATA ATTGGACTAT GGATGAAATT
GTGCTGTGCG CTGGAATAAG ATCTTCGTGC ACTTACTGTG GAGTTTTGAG GCGACAAGCT
TTAGACAGAG GAGCGGCCAA GCTCGGAATC AACCATGTAG TAACTGGCCA TAACGCAGAT
GATATGGCTG AGACCGTGTT GATGAATCTT TTGCGTGGTG ACACTGCCAG ATTGGAAAAA
TCCTGTGCCA TTATCACTCA GTCTGCTGGG TCTCCTATCA AGAGGTCCAA GCCTTTCAAA
TACACGTACC AGAAGGAGAT TGTGCTATAT GCTCATTACA AGAAGCTTGA CTACTTTTCT
ACCGAATGTA CTTACGCTCC TGAAGCATTT AGAGGCACAG CACGTGAGTT GTTGAAGTCG
TTGGAGTCCA TAAGACCTTC TTGTATTATG GACATCATAT ACAGTGGAGA ACATTTGGTA
CTAGCTCCAA AGAAAAAGAA GATCACGACA CTGTACAAGA CAAACAAGAA GAAAACGCAT
ACGGAGAACG AAGTCAACGC TGACGGCTCT GTGTCGTTGG GAAGAAAGAA GCAGTTTGAA
GACGGAAACA GATGTGAGAA GTGTGGTTAC TTGTCCTCCA ACAGAATCTG CAAGGCATGT
ATGCTTCTTG CTGGTTTGGA GATGAATAGA GCCAAAGTGA GCATAGACAA CAACACGGCT
GTGGACGGCG CAGCTGTGTT GACCAGAACC TTAGAACAAT TGAGTTTCTA G
 
Protein sequence
MTEISAKKVK VSALCELCHA RKAVMKRPKN LQKLCKDCFY KVFETEIHNT IVDAKLFLPG 
DKVAIGASGG KDSTVLASVL KTLNERYDYG LILVLLSIDE GIKGYRDDSL ATVKRNQVQY
EMPLEIISYR DLYNWTMDEI VLCAGIRSSC TYCGVLRRQA LDRGAAKLGI NHVVTGHNAD
DMAETVLMNL LRGDTARLEK SCAIITQSAG SPIKRSKPFK YTYQKEIVLY AHYKKLDYFS
TECTYAPEAF RGTARELLKS LESIRPSCIM DIIYSGEHLV LAPKKKKITT LYKTNKKKTH
TENEVNADGS VSLGRKKQFE DGNRCEKCGY LSSNRICKAC MLLAGLEMNR AKVSIDNNTA
VDGAAVLTRT LEQLSF