Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_36967 |
Symbol | |
ID | 4840478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 447982 |
End bp | 448905 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391793 |
Product | predicted protein |
Protein accession | XP_001386288 |
Protein GI | 126139531 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.177714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.228714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTTA CCAAGTTACG TGTAGCCTAT ATCCCCGAGC ACTTCTCGAC CCCATTGATG TTTGCCGAAA AGCACGGCTT CTACGAAAAG AGGGGACTTG AGATTGAGTT CGTAGAAGTC ATTGAAGGTT CGGGCCGTCT TATCAAGTTA CTCAATTCCA ATGAGGTCGA CATTGCCATT GGATTGACCG AAGCTTTTGT TGCTGATATT GCCAAAGGTA ACGATGCCTA CAAGCTTATC GATACCTATG TTAAATCTCC ATTATTATGG GCAATCAGTA CTGGATCGAA ACGAGATGAA TTGACCGTAG CTCAGCAATT GGATGGAAAA GCCATTGGTG TCTCCAGAAT CGGATCTGGT TCTTATGTGA TGAGTTTTGT GTTGGCACAC AGTTTGAAAT TTGCCCACGA ATTCAGTTCT TTCCCGATAT TGTCCAACTT CCAGAACTTG CGCGATTCTG TCAACTTGAA GTTCGGCAAT GAGTCCGAGT TGAAGAACTC CGACGCTTTC ATGTGGGAAT ACTTCACCTC CAAGAAGTAC TATGACAACG GTGAAATTAA GCAGATCGGC GAGATTTACA CTCCTTGGCC ATCTTGGGTG ATCAATGCTA CTAAAAATGT CTACACTTCA AACAAGAAGG CTGTTTCTGA CTTCCTAGCT GCTGTCAACG AAGGCATTGC TTATTTCAAC AGCCACGTCG ACGAGGCTAT CGACCATATC GGCACTAACT TGGACTACTC TAAGGAAGAT GCCCAGGAAT GGTCCAAGAC CGTCCAGTTT AACGACAAGT TGGGTGAAGC CGGACTTGAC TGGGAATCAG TTGTCAGCAA GACTAGTGCT ATCTTGAAAC TTGCTGGTGT CTTGTCAGAC TCCGACGAGG TAATTGCTCA GCGTTTGGAA GGAGGAGTAG TCAGACAATT GTAA
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Protein sequence | MSLTKLRVAY IPEHFSTPLM FAEKHGFYEK RGLEIEFVEV IEGSGRLIKL LNSNEVDIAI GLTEAFVADI AKGNDAYKLI DTYVKSPLLW AISTGSKRDE LTVAQQLDGK AIGVSRIGSG SYVMSFVLAH SLKFAHEFSS FPILSNFQNL RDSVNLKFGN ESELKNSDAF MWEYFTSKKY YDNGEIKQIG EIYTPWPSWV INATKNVYTS NKKAVSDFLA AVNEGIAYFN SHVDEAIDHI GTNLDYSKED AQEWSKTVQF NDKLGEAGLD WESVVSKTSA ILKLAGVLSD SDEVIAQRLE GGVVRQL
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